C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beaded filament structural protein 2, phakinin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032556 Bfsp2 10090 - 9:103424920-103480420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000124310 Bfsp2-001 103424920-103480420 protein_coding
  ENSMUST00000136636 Bfsp2-002 103424924-103449096 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124310ENSMUST00000136636
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124310 N/A N/A 0.498±0.37 N/A N/A 0.043±0.02 0.070±0.02 0.061±0.01 0.078±0.00 0.068±0.00 0.097±0.03 0.080±0.00 0.076±0.00
ENSMUST00000136636 0.155±0.02 0.185±0.00 0.369±0.00 1.079±0.51 0.622±0.17 0.144±0.12 0.181±0.18 0.935±1.07 0.149±0.04 0.295±0.22 0.192±0.13 0.170±0.06 0.515±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z7 CIL_0007Z7_0002 VISTA 9:103379109-103979657

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005212 IDA structural constituent of eye lens
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005882 IDA intermediate filament
GO:0005886 IEA plasma membrane
GO:0007010 IMP cytoskeleton organization
GO:0007601 IEA visual perception
GO:0045104 IMP intermediate filament cytoskeleton organization
GO:0048469 IMP cell maturation
GO:0050896 IEA response to stimulus
GO:0070307 IMP lens fiber cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011998 bfsp2 beaded filament structural protein 2, phakinin protein_coding Danio_rerio
ENSG00000170819 BFSP2 beaded filament structural protein 2, phakinin protein_coding Homo_sapiens

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