C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitogen-activated protein kinase-activated protein kinase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032577 Mapkapk3 10090 - 9:107254927-107289877 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035194 Mapkapk3-001 107254927-107289877 protein_coding
  ENSMUST00000128175 Mapkapk3-008 107256044-107257292 retained_intron
  ENSMUST00000134682 Mapkapk3-005 107263702-107280915 protein_coding
  ENSMUST00000141596 Mapkapk3-002 107284674-107289779 processed_transcript
  ENSMUST00000141674 Mapkapk3-006 107258784-107261936 processed_transcript
  ENSMUST00000143487 Mapkapk3-003 107254935-107289747 retained_intron
  ENSMUST00000151190 Mapkapk3-007 107263702-107280915 protein_coding
  ENSMUST00000155860 Mapkapk3-004 107259555-107289779 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035194ENSMUST00000128175ENSMUST00000143487ENSMUST00000155860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035194 13.248±2.96 18.335±3.21 16.069±1.96 0.564±0.18 17.810±2.83 29.303±2.25 11.406±0.86 10.739±0.71 3.753±1.79 15.616±1.11 13.922±1.83 10.774±2.79 0.863±0.41 1.373±0.68
ENSMUST00000128175 N/A N/A N/A 1.728±0.00 N/A N/A N/A N/A N/A N/A N/A 29.146±0.00 2.292±0.46 1.899±0.00
ENSMUST00000143487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.570±0.00 N/A N/A
ENSMUST00000155860 N/A 7.406±0.83 N/A N/A 4.255±0.00 8.835±0.00 N/A N/A 0.599±0.05 N/A N/A 7.328±2.64 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002224 IMP toll-like receptor signaling pathway
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0031965 IEA nuclear membrane
GO:0032496 IMP response to lipopolysaccharide
GO:0034097 ISS response to cytokine
GO:0044351 IMP macropinocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089016 mapkapk3 mitogen-activated protein kinase-activated protein kinase 3 protein_coding Danio_rerio
ENSG00000114738 MAPKAPK3 mitogen-activated protein kinase-activated protein kinase 3 protein_coding Homo_sapiens

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