C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: aminolevulinic acid synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032786 Alas1 10090 - 9:106233455-106248126 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074082 Alas1-002 106233927-106247856 protein_coding
  ENSMUST00000112524 Alas1-003 106233455-106247730 protein_coding
  ENSMUST00000123115 Alas1-008 106235389-106237084 retained_intron
  ENSMUST00000123601 Alas1-006 106236678-106240033 retained_intron
  ENSMUST00000133617 Alas1-005 106238816-106247852 nonsense_mediated_decay
  ENSMUST00000134053 Alas1-004 106233942-106243634 processed_transcript
  ENSMUST00000141118 Alas1-001 106233458-106248126 protein_coding
  ENSMUST00000143125 Alas1-007 106234195-106238730 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074082ENSMUST00000112524ENSMUST00000123601ENSMUST00000133617ENSMUST00000134053ENSMUST00000141118
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074082 34.848±6.62 220.918±17.22 9.268±1.45 5.275±1.81 29.204±8.00 43.183±4.96 69.657±21.28 56.229±8.61 84.177±80.98 108.491±30.80 22.099±1.62 60.461±22.85 30.909±27.64 11.054±5.25
ENSMUST00000112524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.004±0.00
ENSMUST00000123601 N/A N/A N/A N/A 18.075±0.00 N/A N/A N/A N/A N/A N/A 25.329±0.00 N/A N/A
ENSMUST00000133617 N/A 164.837±44.89 N/A N/A N/A 32.248±0.00 43.587±0.00 40.588±3.95 20.101±17.86 N/A N/A 40.194±5.11 N/A N/A
ENSMUST00000134053 27.888±2.33 45.077±0.00 11.779±0.80 7.616±3.33 11.152±3.74 25.506±3.98 29.967±7.25 N/A 8.081±2.14 N/A 23.559±3.26 28.199±10.22 31.269±15.87 9.590±2.39
ENSMUST00000141118 N/A N/A 4.196±0.36 1.781±0.01 5.922±0.65 N/A 10.113±0.00 13.178±0.00 2.818±0.41 N/A 4.788±0.00 N/A 3.978±0.67 7.792±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003870 IEA 5-aminolevulinate synthase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0006778 IEA porphyrin-containing compound metabolic process
GO:0006782 IEA protoporphyrinogen IX biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021059 alas1 aminolevulinate, delta-, synthetase 1 protein_coding Danio_rerio
ENSG00000023330 ALAS1 aminolevulinate, delta-, synthase 1 protein_coding Homo_sapiens

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