C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnitine deficiency-associated gene expressed in ventricle 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032803 Cdv3 10090 - 9:103353094-103365840 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035484 Cdv3-001 103353094-103365840 protein_coding
  ENSMUST00000072249 Cdv3-005 103353108-103365538 protein_coding
  ENSMUST00000116517 Cdv3-003 103353104-103364897 protein_coding
  ENSMUST00000189875 Cdv3-007 103355908-103365127 protein_coding
  ENSMUST00000189896 Cdv3-002 103355950-103365619 protein_coding
  ENSMUST00000190127 Cdv3-006 103361604-103364980 retained_intron
  ENSMUST00000190226 Cdv3-004 103353104-103364979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035484ENSMUST00000072249ENSMUST00000189875ENSMUST00000189896ENSMUST00000190226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035484 13.352±3.85 36.489±4.37 12.978±0.60 16.864±0.47 23.117±9.88 23.536±2.02 8.646±0.95 10.585±1.75 15.508±5.44 16.723±4.54 15.097±4.08 40.941±11.09 24.256±8.75 31.785±6.07
ENSMUST00000072249 7.522±2.11 N/A 8.901±0.55 10.497±2.17 2.708±0.61 N/A 5.617±1.95 5.886±1.76 6.784±2.48 7.310±0.00 24.427±2.24 15.273±7.40 30.293±10.46 9.135±0.00
ENSMUST00000189875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 87.331±0.00 182.671±0.00 2184.440±0.00
ENSMUST00000189896 N/A 28.429±9.37 N/A N/A 10.011±0.00 9.935±2.64 N/A N/A N/A N/A N/A 17.626±4.15 N/A 142.903±30.11
ENSMUST00000190226 N/A N/A N/A 7.451±0.00 1.854±0.00 N/A 2.807±0.11 N/A 3.067±0.00 N/A 10.348±2.29 11.152±4.59 25.380±21.41 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023028 cdv3 carnitine deficiency-associated gene expressed in ventricle 3 protein_coding Danio_rerio
ENSG00000091527 CDV3 CDV3 homolog (mouse) protein_coding Homo_sapiens

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