C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine deficiency-associated gene expressed in ventricle 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035484 Cdv3-001 ENSMUSG00000032803 10090 - 9:103353094-103365840 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035484 13.352±3.85 36.489±4.37 12.978±0.60 16.864±0.47 23.117±9.88 23.536±2.02 8.646±0.95 10.585±1.75 15.508±5.44 16.723±4.54 15.097±4.08 40.941±11.09 24.256±8.75 31.785±6.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264993 CDV3-001 protein_coding Homo_sapiens 0 1229
ENST00000420115 CDV3-003 protein_coding Homo_sapiens 0 750
ENST00000431519 CDV3-002 protein_coding Homo_sapiens 0 479
ENST00000471403 CDV3P1-001 processed_pseudogene Homo_sapiens 0 549
ENST00000503932 CDV3-004 protein_coding Homo_sapiens 0 595
ENST00000504867 CDV3-006 protein_coding Homo_sapiens 0 263
ENST00000507408 CDV3-009 protein_coding Homo_sapiens 0 420
ENST00000508481 CDV3-005 protein_coding Homo_sapiens 0 697
ENST00000511392 CDV3-007 protein_coding Homo_sapiens 0 438
ENST00000515421 CDV3-008 protein_coding Homo_sapiens 0 464

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