C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Fanconi anemia, complementation group A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032815 Fanca 10090 - 8:123268300-123318576 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035495 Fanca-001 123268300-123318576 protein_coding
  ENSMUST00000118395 Fanca-005 123302075-123318560 protein_coding
  ENSMUST00000126834 Fanca-009 123271205-123278054 protein_coding
  ENSMUST00000127904 Fanca-003 123286404-123313362 protein_coding
  ENSMUST00000133950 Fanca-006 123289361-123291861 retained_intron
  ENSMUST00000135702 Fanca-011 123269290-123274223 processed_transcript
  ENSMUST00000146687 Fanca-007 123277856-123282667 retained_intron
  ENSMUST00000150318 Fanca-004 123312283-123318560 retained_intron
  ENSMUST00000155279 Fanca-008 123277416-123281287 processed_transcript
  ENSMUST00000155488 Fanca-002 123286189-123318560 retained_intron
  ENSMUST00000155510 Fanca-010 123274158-123276598 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005Z CIL_00005Z_0002 CGP 8:123242356-123269745
CIL_000063 CIL_000063_0002 CGP 8:123254195-123318576
CIL_000069 CIL_000069_0002 CGP 8:123268300-123369515

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0007140 IMP male meiosis
GO:0008584 IMP male gonad development
GO:0008585 IMP female gonad development
GO:0042127 IMP regulation of cell proliferation
GO:0043240 ISS Fanconi anaemia nuclear complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070216 FANCA Fanconi anemia, complementation group A protein_coding Danio_rerio
ENSG00000187741 FANCA Fanconi anemia, complementation group A protein_coding Homo_sapiens

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