C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4933427E13 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033015 4933427E13Rik 10090 + 11:25232626-25367137 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044347 4933427E13Rik-201 25329957-25358187 lincRNA
  ENSMUST00000125234 4933427E13Rik-001 25326107-25367137 lincRNA
  ENSMUST00000125309 4933427E13Rik-002 25326136-25330718 lincRNA
  ENSMUST00000191131 4933427E13Rik-003 25232626-25367133 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000044347ENSMUST00000125234ENSMUST00000125309
Transcript ID Testis
ENSMUST00000044347 0.984±0.00
ENSMUST00000125234 0.460±0.14
ENSMUST00000125309 0.939±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0002 UCNEbase 11:24062983-26981636
CIL_0008VM CIL_0008VM_0002 VISTA 11:24674129-25276254
CIL_00080C CIL_00080C_0002 VISTA 11:24676120-25278364
CIL_0008X9 CIL_0008X9_0002 VISTA 11:24681420-25284196
CIL_0008TS CIL_0008TS_0002 VISTA 11:24799105-25401616
CIL_0008BS CIL_0008BS_0002 VISTA 11:24813307-25413939
CIL_000804 CIL_000804_0002 VISTA 11:24987254-25588542
CIL_0008X4 CIL_0008X4_0002 VISTA 11:25056345-25657682
CIL_0008XW CIL_0008XW_0002 VISTA 11:25229955-25831889
CIL_00080J CIL_00080J_0002 VISTA 11:25231831-25832986

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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