C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008X4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1119 VISTA 9606 2:58949469-59550820
GeneTranscriptPositionBiotype
ENSG00000222030 (AC007131.1)
 ENST00000409590 (AC007131.1-001) 59217708-59279400 lincRNA
ENSG00000231815 (AC007179.1)
 ENST00000415159 (AC007179.1-001) 59435213-59442261 lincRNA
ENSG00000271955 (RP11-444A22.1)
 ENST00000606382 (RP11-444A22.1-001) 59218680-60100200 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008X4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1119 VISTA 10090 11:25056345-25657682
GeneTranscriptPositionBiotype
ENSMUSG00000032985 (5730522E02Rik)
RIKEN cDNA 5730522E02 gene 		ENSMUST00000109511 (5730522E02Rik-001) 25619087-26210572 protein_coding
ENSMUST00000125773 (5730522E02Rik-004) 25617668-26210569 processed_transcript
ENSMUST00000125987 (5730522E02Rik-006) 26103185-26210763 processed_transcript
ENSMUST00000135168 (5730522E02Rik-003) 25849297-26081600 processed_transcript
ENSMUST00000144503 (5730522E02Rik-007) 25602816-25620098 processed_transcript
ENSMUST00000144841 (5730522E02Rik-005) 25635312-25652068 processed_transcript
ENSMUST00000153834 (5730522E02Rik-002) 25602763-25648147 processed_transcript
ENSMUST00000179180 (5730522E02Rik-201) 25647915-25769141 protein_coding
ENSMUSG00000033015 (4933427E13Rik)
RIKEN cDNA 4933427E13 gene 		ENSMUST00000044347 (4933427E13Rik-201) 25329957-25358187 lincRNA
ENSMUST00000125234 (4933427E13Rik-001) 25326107-25367137 lincRNA
ENSMUST00000125309 (4933427E13Rik-002) 25326136-25330718 lincRNA
ENSMUST00000191131 (4933427E13Rik-003) 25232626-25367133 lincRNA
ENSMUSG00000086439 (Gm12069)
predicted gene 12069 		ENSMUST00000145127 (Gm12069-001) 25301263-25322786 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X4_0001ENSG00000222030ENST00000409590ENSG00000231815ENST00000415159ENSG00000271955ENST00000606382CIL_0008X4_0002ENSMUSG00000032985ENSMUST00000109511ENSMUST00000125773ENSMUST00000125987ENSMUST00000135168ENSMUST00000144503ENSMUST00000144841ENSMUST00000153834ENSMUST00000179180ENSMUSG00000033015ENSMUST00000044347ENSMUST00000125234ENSMUST00000125309ENSMUST00000191131ENSMUSG00000086439ENSMUST00000145127
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X4_0001ENSG00000222030ENST00000409590ENSG00000231815ENST00000415159ENSG00000271955ENST00000606382CIL_0008X4_0002ENSMUSG00000032985ENSMUST00000109511ENSMUST00000125773ENSMUST00000125987ENSMUST00000135168ENSMUST00000144841ENSMUST00000153834ENSMUST00000179180ENSMUSG00000033015ENSMUST00000044347ENSMUST00000125234ENSMUST00000125309ENSMUSG00000086439ENSMUST00000145127
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000222030 ENST00000409590 N/A N/A 0.098±0.06 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 0.084±0.04 0.293±0.04
ENSG00000231815 ENST00000415159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.07
ENSG00000271955 ENST00000606382 N/A 0.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032985 ENSMUST00000109511 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A 0.029±0.00 N/A N/A
ENSMUST00000125773 0.118±0.00 0.172±0.02 2.381±1.75 0.121±0.07 N/A N/A 0.087±0.03 0.174±0.08 0.096±0.00 N/A 0.398±0.13 0.055±0.00 0.086±0.03
ENSMUST00000125987 0.448±0.11 0.429±0.18 N/A 0.376±0.08 0.380±0.30 0.083±0.00 0.497±0.00 0.478±0.02 0.202±0.10 N/A 0.313±0.13 0.095±0.08 0.140±0.05
ENSMUST00000135168 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144841 0.022±0.00 N/A N/A N/A N/A 0.012±0.00 0.033±0.01 0.038±0.00 N/A N/A 0.012±0.01 0.006±0.00 0.016±0.00
ENSMUST00000153834 0.106±0.01 N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A 0.110±0.00 0.115±0.00 N/A
ENSMUST00000179180 N/A N/A N/A 0.168±0.00 N/A 0.111±0.00 N/A 0.126±0.00 N/A N/A 0.333±0.30 N/A 0.219±0.00
ENSMUSG00000033015 ENSMUST00000044347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.984±0.00
ENSMUST00000125234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.460±0.14
ENSMUST00000125309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.939±0.26
ENSMUST00000191131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086439 ENSMUST00000145127 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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