C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: brain glycogen phosphorylase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033059 Pygb 10090 + 2:150786735-150831758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045441 Pygb-001 150786735-150831758 protein_coding
  ENSMUST00000129610 Pygb-004 150823607-150828473 retained_intron
  ENSMUST00000135717 Pygb-005 150828388-150830634 retained_intron
  ENSMUST00000139938 Pygb-002 150789006-150814001 processed_transcript
  ENSMUST00000154366 Pygb-003 150815322-150817760 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045441 62.331±12.99 22.903±4.02 137.338±2.63 34.011±14.11 37.000±3.10 58.816±18.32 156.679±15.62 10.578±2.50 7.148±5.63 26.247±10.27 1.163±0.32 52.684±22.47 13.919±5.21 4.054±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MT CIL_0004MT_0003 CGP 2:150749042-150831758
CIL_0004MU CIL_0004MU_0003 CGP 2:150786735-150904741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005977 IEA glycogen metabolic process
GO:0008184 IEA glycogen phosphorylase activity
GO:0016020 IEA membrane
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002021 pygb phosphorylase, glycogen; brain protein_coding Danio_rerio
ENSG00000100994 PYGB phosphorylase, glycogen; brain protein_coding Homo_sapiens

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