C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain glycogen phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045441 Pygb-001 ENSMUSG00000033059 10090 + 2:150786735-150831758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045441 62.331±12.99 22.903±4.02 137.338±2.63 34.011±14.11 37.000±3.10 58.816±18.32 156.679±15.62 10.578±2.50 7.148±5.63 26.247±10.27 1.163±0.32 52.684±22.47 13.919±5.21 4.054±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MT CIL_0004MT_0003 CGP 2:150749042-150831758
CIL_0004MU CIL_0004MU_0003 CGP 2:150786735-150904741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005977 IEA glycogen metabolic process
GO:0008184 IEA glycogen phosphorylase activity
GO:0016020 IEA membrane
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000164139 PYGM-001 protein_coding Homo_sapiens 0 1738
ENST00000216962 PYGB-001 protein_coding Homo_sapiens 0 3090
ENST00000377432 PYGM-002 protein_coding Homo_sapiens 0 1373
ENST00000428458 PYGB-002 protein_coding Homo_sapiens 0 784
ENST00000460413 PYGM-005 processed_transcript Homo_sapiens 0 215
ENST00000471359 PYGB-003 processed_transcript Homo_sapiens 0 418

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