C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulated endocrine-specific protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033061 Resp18 10090 - 1:75272199-75278415 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039534 Resp18-001 75272199-75278415 protein_coding
  ENSMUST00000186229 Resp18-002 75272311-75278316 nonsense_mediated_decay
  ENSMUST00000189203 Resp18-003 75274070-75278284 retained_intron
  ENSMUST00000191283 Resp18-005 75272201-75274263 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039534ENSMUST00000186229ENSMUST00000189203ENSMUST00000191283
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039534 43.370±10.51 0.167±0.04 18.855±10.38 7.585±3.05 0.067±0.03 0.113±0.00 0.012±0.00 1.121±0.49 0.085±0.00 0.176±0.00 0.061±0.00 0.141±0.09
ENSMUST00000186229 N/A 0.057±0.00 13.960±0.00 N/A 0.098±0.02 0.137±0.07 0.037±0.02 N/A N/A N/A N/A 0.053±0.00
ENSMUST00000189203 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A N/A
ENSMUST00000191283 N/A N/A 20.502±0.00 N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A 0.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006NX CIL_0006NX_0002 CGP 1:75247027-75278415
CIL_0006NY CIL_0006NY_0002 CGP 1:75272199-75317990

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0003674 ND molecular_function
GO:0005576 IEA extracellular region
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0030141 IEA secretory granule
GO:0043204 IEA perikaryon
GO:0048237 IEA rough endoplasmic reticulum lumen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000182698 RESP18 regulated endocrine-specific protein 18 protein_coding Homo_sapiens

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