C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006NX_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000054356-ENSG00000182698 | CGP | 9606 | 2:219289623-219333177  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000054356  (PTPRN)protein tyrosine phosphatase, receptor type, N |
ENST00000295718 (PTPRN-001)
|
219289623-219309573 | protein_coding | |
|
ENST00000409251 (PTPRN-003)
|
219289623-219309498 | protein_coding | ||
|
ENST00000412847 (PTPRN-012)
|
219302485-219309009 | protein_coding | ||
|
ENST00000423636 (PTPRN-021)
|
219289841-219308984 | protein_coding | ||
|
ENST00000440552 (PTPRN-011)
|
219302618-219309173 | protein_coding | ||
|
ENST00000442029 (PTPRN-013)
|
219302685-219309007 | protein_coding | ||
|
ENST00000443981 (PTPRN-020)
|
219289649-219296341 | protein_coding | ||
|
ENST00000446182 (PTPRN-008)
|
219302487-219309648 | protein_coding | ||
|
ENST00000451506 (PTPRN-009)
|
219302744-219309538 | protein_coding | ||
|
ENST00000460801 (PTPRN-007)
|
219289625-219292896 | retained_intron | ||
|
ENST00000462351 (PTPRN-006)
|
219289625-219308197 | retained_intron | ||
|
ENST00000468454 (PTPRN-014)
|
219307018-219308923 | processed_transcript | ||
|
ENST00000476930 (PTPRN-016)
|
219302663-219304141 | retained_intron | ||
|
ENST00000477819 (PTPRN-015)
|
219307528-219308340 | retained_intron | ||
|
ENST00000484986 (PTPRN-010)
|
219307483-219309402 | retained_intron | ||
|
ENST00000486480 (PTPRN-017)
|
219297423-219299572 | retained_intron | ||
|
ENST00000489650 (PTPRN-018)
|
219297979-219299492 | retained_intron | ||
|
ENST00000497977 (PTPRN-019)
|
219290052-219296758 | processed_transcript | ||
|
ENST00000606213 (PTPRN-005)
|
219302768-219309381 | nonsense_mediated_decay | ||
|
ENSG00000182698 (RESP18) regulated endocrine-specific protein 18 |
ENST00000333527 (RESP18-001)
|
219327409-219333177 | protein_coding | |
|
ENST00000392083 (RESP18-002)
|
219327409-219332629 | protein_coding | ||
|
ENST00000470719 (RESP18-003)
|
219327409-219331178 | retained_intron | ||
| CIL_0006NX_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026204-ENSMUSG00000033061 | CGP | 10090 | 1:75247027-75278415 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026204 (Ptprn) protein tyrosine phosphatase, receptor type, N |
ENSMUST00000027404 (Ptprn-001)
|
75247027-75264213 | protein_coding | |
|
ENSMUST00000185849 (Ptprn-003)
|
75258559-75264502 | protein_coding | ||
|
ENSMUST00000186178 (Ptprn-005)
|
75258491-75263907 | protein_coding | ||
|
ENSMUST00000187216 (Ptprn-007)
|
75256858-75257997 | retained_intron | ||
|
ENSMUST00000188401 (Ptprn-006)
|
75258583-75264208 | processed_transcript | ||
|
ENSMUST00000189769 (Ptprn-004)
|
75258491-75264050 | protein_coding | ||
|
ENSMUSG00000033061 (Resp18) regulated endocrine-specific protein 18 |
ENSMUST00000039534 (Resp18-001)
|
75272199-75278415 | protein_coding | |
|
ENSMUST00000186229 (Resp18-002)
|
75272311-75278316 | nonsense_mediated_decay | ||
|
ENSMUST00000189203 (Resp18-003)
|
75274070-75278284 | retained_intron | ||
|
ENSMUST00000191283 (Resp18-005)
|
75272201-75274263 | retained_intron | ||
|
ENSMUSG00000101840 (RP23-321N22.11) predicted gene 28294 |
ENSMUST00000191154 (RP23-321N22.11-001)
|
75252322-75257427 | antisense | |
Expression Patterns
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