C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin Pas1/PHO80 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033159 Cnppd1 10090 - 1:75134554-75142711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041213 Cnppd1-002 75135771-75142697 protein_coding
  ENSMUST00000168720 Cnppd1-001 75134554-75142638 protein_coding
  ENSMUST00000187888 Cnppd1-007 75136785-75137861 retained_intron
  ENSMUST00000188037 Cnppd1-008 75137092-75137806 retained_intron
  ENSMUST00000189043 Cnppd1-004 75135771-75138876 retained_intron
  ENSMUST00000189403 Cnppd1-006 75139347-75141803 protein_coding
  ENSMUST00000189809 Cnppd1-005 75139597-75142711 protein_coding
  ENSMUST00000190679 Cnppd1-003 75135768-75141691 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041213ENSMUST00000168720ENSMUST00000189043ENSMUST00000189809ENSMUST00000190679
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041213 6.243±1.58 9.389±0.77 7.561±2.00 16.638±8.15 6.079±1.65 4.774±0.04 3.904±1.20 8.372±0.79 6.986±1.66 6.214±0.99 5.703±1.32 10.288±3.11 9.895±5.97 13.315±3.82
ENSMUST00000168720 3.185±0.06 2.043±0.22 3.119±0.20 1.218±0.00 N/A 4.772±0.73 0.872±0.24 3.022±0.22 2.204±0.53 3.599±0.28 N/A 3.283±0.82 2.623±0.78 N/A
ENSMUST00000189043 N/A 3.069±0.00 N/A 3.701±0.47 N/A N/A N/A N/A N/A N/A 1.110±0.03 4.679±0.16 N/A N/A
ENSMUST00000189809 N/A N/A N/A N/A 24.775±0.00 N/A N/A N/A N/A N/A N/A N/A 44.563±0.00 N/A
ENSMUST00000190679 13.135±2.63 6.302±0.13 22.440±4.95 5.308±1.00 22.829±7.71 30.554±2.56 4.145±0.72 17.104±1.19 17.967±10.45 19.018±0.75 2.022±0.24 18.657±8.30 17.572±5.68 5.948±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006EE CIL_0006EE_0002 CGP 1:75125541-75142711
CIL_0000OL CIL_0000OL_0002 CGP 1:75134554-75147913

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027078 cnppd1 cyclin Pas1/PHO80 domain containing 1 protein_coding Danio_rerio
ENSG00000115649 CNPPD1 cyclin Pas1/PHO80 domain containing 1 protein_coding Homo_sapiens

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