C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 37
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033364 Usp37 10090 - 1:74435511-74544284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044260 Usp37-002 74435511-74505803 protein_coding
  ENSMUST00000186282 Usp37-007 74495718-74505806 protein_coding
  ENSMUST00000187590 Usp37-005 74499956-74506283 processed_transcript
  ENSMUST00000188012 Usp37-004 74439127-74467574 processed_transcript
  ENSMUST00000189257 Usp37-001 74437730-74544284 protein_coding
  ENSMUST00000190592 Usp37-006 74499872-74505791 retained_intron
  ENSMUST00000191058 Usp37-003 74449502-74505785 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000044260ENSMUST00000188012ENSMUST00000189257
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044260 1.356±0.00 1.537±0.14 0.607±0.00 3.368±1.22 2.038±0.12 0.826±0.26 2.636±1.68 1.774±0.32 0.856±0.39 3.204±0.78 3.344±0.64 1.973±0.00
ENSMUST00000188012 N/A N/A N/A 4.723±0.00 N/A N/A N/A N/A N/A 7.218±0.00 9.098±0.00 26.740±18.07
ENSMUST00000189257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.243±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000650 CIL_000650_0002 CGP 1:74391509-74435559
CIL_000651 CIL_000651_0002 CGP 1:74409376-74544284
CIL_00064Y CIL_00064Y_0002 CGP 1:74435511-74544284

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007067 IEA mitotic nuclear division
GO:0016579 IEA protein deubiquitination
GO:0019901 IEA protein kinase binding
GO:0035871 ISS protein K11-linked deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040990 usp37 ubiquitin specific peptidase 37 protein_coding Danio_rerio
ENSG00000135913 USP37 ubiquitin specific peptidase 37 protein_coding Homo_sapiens

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