Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	family with sequence similarity 20, member B
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000033557	Fam20b	10090	-	1:156678532-156719086	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000086153		Fam20b-003	156678571-156719086	protein_coding
	ENSMUST00000122424		Fam20b-001	156678532-156719072	protein_coding
	ENSMUST00000147931		Fam20b-002	156701642-156716982	retained_intron
	ENSMUST00000188941		Fam20b-004	156698731-156703794	processed_transcript
	ENSMUST00000190878		Fam20b-005	156685957-156698885	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000086153	2.696±0.25	1.631±0.00	4.945±1.39	2.970±0.77	2.134±0.46	6.050±1.26	3.021±0.24	3.730±0.65	1.396±0.65	3.864±0.41	6.474±1.56	4.257±2.73	4.643±0.97	N/A
ENSMUST00000122424	10.984±1.96	11.089±1.48	8.033±0.73	4.521±1.65	9.890±1.20	20.468±2.58	10.633±0.98	20.792±1.76	3.523±0.99	12.225±1.17	7.311±1.60	12.236±5.38	5.443±1.96	7.750±3.54

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000656	CIL_000656_0002	CGP	1:156678532-156939626

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005524	IEA	ATP binding
GO:0005794	ISS	Golgi apparatus
GO:0016021	IEA	integral component of membrane
GO:0016301	IEA	kinase activity
GO:0016310	IEA	phosphorylation
GO:0016773	ISS	phosphotransferase activity, alcohol group as acceptor

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000008573	fam20b	family with sequence similarity 20, member B (H. sapiens)	protein_coding	Danio_rerio
ENSG00000116199	FAM20B	family with sequence similarity 20, member B	protein_coding	Homo_sapiens

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