C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 20, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122424 Fam20b-001 ENSMUSG00000033557 10090 - 1:156678532-156719072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122424
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122424 10.984±1.96 11.089±1.48 8.033±0.73 4.521±1.65 9.890±1.20 20.468±2.58 10.633±0.98 20.792±1.76 3.523±0.99 12.225±1.17 7.311±1.60 12.236±5.38 5.443±1.96 7.750±3.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000656 CIL_000656_0002 CGP 1:156678532-156939626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005794 ISS Golgi apparatus
GO:0016021 IEA integral component of membrane
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016773 ISS phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263733 FAM20B-001 protein_coding Homo_sapiens 0 1807
ENST00000440702 FAM20B-002 protein_coding Homo_sapiens 0 641
ENST00000493762 RP11-379K17.2-001 processed_pseudogene Homo_sapiens 0 1144

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