C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence BC034090
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033722 BC034090 10090 - 1:155212471-155244444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035914 BC034090-009 155212473-155232740 protein_coding
  ENSMUST00000185937 BC034090-006 155212471-155213981 retained_intron
  ENSMUST00000186082 BC034090-002 155224911-155240906 retained_intron
  ENSMUST00000186156 BC034090-001 155212471-155244444 protein_coding
  ENSMUST00000186551 BC034090-005 155218271-155225174 processed_transcript
  ENSMUST00000187096 BC034090-003 155226040-155232911 protein_coding
  ENSMUST00000187781 BC034090-007 155225690-155229894 processed_transcript
  ENSMUST00000188492 BC034090-008 155229114-155231904 retained_intron
  ENSMUST00000190976 BC034090-004 155217521-155225425 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035914ENSMUST00000185937ENSMUST00000186156ENSMUST00000186551ENSMUST00000187096ENSMUST00000187781ENSMUST00000188492ENSMUST00000190976
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035914 1.138±0.35 2.560±0.65 1.333±0.04 1.432±0.10 0.566±0.17 0.639±0.00 2.854±0.77 7.002±2.37 0.073±0.04 1.012±0.34 0.056±0.02 4.356±1.66 2.364±0.77 0.769±0.55
ENSMUST00000185937 N/A N/A N/A 0.996±0.14 N/A 1.384±0.08 3.629±0.47 13.119±1.63 0.146±0.03 N/A 0.147±0.05 3.119±0.94 0.348±0.00 0.127±0.00
ENSMUST00000186156 1.238±0.88 4.276±3.97 2.683±0.08 0.692±0.21 1.310±0.45 1.246±0.43 3.504±0.13 12.129±3.07 0.073±0.03 1.104±0.52 0.102±0.06 3.504±1.34 2.422±0.86 0.170±0.08
ENSMUST00000186551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A
ENSMUST00000187096 N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A 0.288±0.03 N/A N/A N/A
ENSMUST00000187781 N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.11 N/A 0.108±0.00 N/A N/A 0.899±0.38
ENSMUST00000188492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.42
ENSMUST00000190976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W1 CIL_0007W1_0002 VISTA 1:154738612-155340657

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071458 si:dkey-121a11.3 si:dkey-121a11.3 protein_coding Danio_rerio
ENSDARG00000093342 si:ch211-13f8.1 si:ch211-13f8.1 protein_coding Danio_rerio
ENSG00000135835 KIAA1614 KIAA1614 protein_coding Homo_sapiens

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