C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stonin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033855 Ston1 10090 + 17:88597684-88662586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064035 Ston1-001 88626555-88648696 protein_coding
  ENSMUST00000112216 Ston1-004 88627364-88637634 retained_intron
  ENSMUST00000132384 Ston1-003 88626833-88637535 retained_intron
  ENSMUST00000137138 Ston1-005 88597684-88635829 protein_coding
  ENSMUST00000150023 Ston1-002 88626609-88662586 protein_coding
  ENSMUST00000153613 Ston1-006 88597696-88645322 processed_transcript
  ENSMUST00000163588 Ston1-201 88626555-88645724 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064035ENSMUST00000112216ENSMUST00000132384ENSMUST00000137138ENSMUST00000150023ENSMUST00000163588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.144±0.13
ENSMUST00000112216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00
ENSMUST00000132384 N/A N/A N/A N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137138 4.050±0.40 2.054±0.81 N/A 0.820±0.00 2.095±0.27 3.208±0.81 1.552±0.47 2.758±0.35 1.047±0.24 5.550±0.83 N/A 4.019±0.82 N/A N/A
ENSMUST00000150023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.690±0.00 N/A 1.195±0.14
ENSMUST00000163588 3.406±2.72 2.174±0.40 5.484±0.00 0.784±0.33 1.690±0.49 2.678±0.76 1.661±0.79 3.884±1.20 1.206±0.64 3.455±0.19 0.624±0.45 4.641±1.45 6.075±1.87 4.576±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IT CIL_0007IT_0002 CGP 17:88530118-88662586
CIL_0003LN CIL_0003LN_0002 CGP 17:88597684-88715152

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0030100 ISS regulation of endocytosis
GO:0030131 IEA clathrin adaptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063670 gtf2a1l general transcription factor IIA, 1-like protein_coding Danio_rerio
ENSG00000068781 STON1-GTF2A1L STON1-GTF2A1L readthrough protein_coding Homo_sapiens
ENSG00000243244 STON1 stonin 1 protein_coding Homo_sapiens

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