C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GC-rich promoter binding protein 1-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034042 Gpbp1l1 10090 + 4:116557658-116593882 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030460 Gpbp1l1-001 116557658-116593882 protein_coding
  ENSMUST00000106475 Gpbp1l1-002 116558079-116593036 protein_coding
  ENSMUST00000131913 Gpbp1l1-003 116578799-116581442 processed_transcript
  ENSMUST00000138837 Gpbp1l1-004 116581353-116588794 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030460ENSMUST00000106475ENSMUST00000138837
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030460 17.589±3.57 11.857±1.58 18.738±0.06 8.941±4.14 17.056±1.93 27.253±3.57 12.608±2.45 22.679±1.07 11.824±3.68 23.621±2.75 6.413±0.50 15.061±3.25 12.889±4.16 15.701±7.19
ENSMUST00000106475 N/A N/A N/A 3.490±0.00 20.317±0.00 N/A N/A N/A N/A N/A 1.595±0.00 9.834±0.86 7.030±1.26 N/A
ENSMUST00000138837 N/A N/A N/A 39.476±0.00 N/A N/A N/A N/A N/A N/A N/A 107.654±0.00 78.107±8.78 56.513±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NC CIL_0001NC_0002 CGP 4:116551633-116593882
CIL_000662 CIL_000662_0002 CGP 4:116557658-116600266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008150 ND biological_process
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075569 gpbp1l1 GC-rich promoter binding protein 1-like 1 protein_coding Danio_rerio
ENSG00000159592 GPBP1L1 GC-rich promoter binding protein 1-like 1 protein_coding Homo_sapiens

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