C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein S17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034211 Mrps17 10090 + 5:129715497-129718875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042191 Mrps17-002 129715503-129718480 protein_coding
  ENSMUST00000118420 Mrps17-006 129715504-129718397 protein_coding
  ENSMUST00000119576 Mrps17-001 129715497-129718694 protein_coding
  ENSMUST00000119604 Mrps17-003 129715516-129718691 protein_coding
  ENSMUST00000119985 Mrps17-010 129715577-129718447 protein_coding
  ENSMUST00000121339 Mrps17-004 129715511-129718875 protein_coding
  ENSMUST00000121813 Mrps17-009 129715558-129718290 protein_coding
  ENSMUST00000136108 Mrps17-008 129715534-129718054 protein_coding
  ENSMUST00000138812 Mrps17-005 129715697-129716833 protein_coding
  ENSMUST00000154358 Mrps17-007 129715509-129716851 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042191ENSMUST00000118420ENSMUST00000119576ENSMUST00000119604ENSMUST00000121339ENSMUST00000121813ENSMUST00000136108ENSMUST00000154358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042191 20.372±3.83 12.595±1.37 30.023±3.87 22.366±9.50 13.019±2.73 7.422±2.28 23.259±2.13 22.732±4.46 29.940±7.55 9.055±0.65 16.247±3.21 12.993±5.61 21.732±9.41 7.487±3.60
ENSMUST00000118420 6.696±0.85 9.605±0.86 N/A N/A 9.021±1.39 7.721±1.71 13.456±0.83 13.238±2.45 11.084±2.93 6.576±2.24 5.395±0.00 12.321±2.85 10.288±1.61 5.693±0.16
ENSMUST00000119576 5.532±0.48 9.501±2.11 N/A 6.797±0.00 9.695±2.03 7.359±2.52 8.403±2.16 9.066±2.67 6.754±0.53 9.687±4.74 N/A 12.644±4.24 7.173±0.16 4.756±0.56
ENSMUST00000119604 5.302±1.03 12.736±3.94 N/A N/A N/A 5.900±1.22 N/A 7.101±0.26 N/A 4.589±0.69 N/A 11.604±0.76 3.559±0.00 3.470±0.08
ENSMUST00000121339 2.687±0.30 N/A 5.664±1.28 4.509±2.56 2.788±0.54 1.800±0.00 3.440±0.22 N/A 7.177±1.08 2.541±0.40 2.792±0.43 5.039±2.28 3.822±1.03 2.122±0.55
ENSMUST00000121813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.370±0.00 N/A N/A N/A
ENSMUST00000136108 N/A N/A N/A N/A N/A N/A N/A 16.539±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000154358 N/A 27.598±5.84 N/A N/A N/A 17.816±7.04 24.658±0.00 N/A 27.046±9.45 N/A N/A 24.236±7.37 N/A 12.024±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000646 CIL_000646_0002 CGP 5:129683391-129718875

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0008150 ND biological_process
GO:0019843 IEA rRNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054164 MRPS17 mitochondrial ribosomal protein S17 protein_coding Danio_rerio
ENSG00000239789 MRPS17 mitochondrial ribosomal protein S17 protein_coding Homo_sapiens
ENSG00000249773 MRPS17 mitochondrial ribosomal protein S17 protein_coding Homo_sapiens

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