C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pygopus 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034910 Pygo1 10090 + 9:72925645-72952181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038489 Pygo1-001 72925645-72952181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038489 1.795±0.99 1.058±0.22 0.988±0.13 5.288±1.94 1.359±0.23 0.277±0.07 2.263±0.26 0.198±0.04 0.151±0.06 1.672±0.11 3.070±0.19 2.058±0.37 0.272±0.19 0.281±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YO CIL_0004YO_0002 CGP 9:72806874-72952181
CIL_0004YP CIL_0004YP_0002 CGP 9:72925645-72973064

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IGI kidney development
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007286 IGI spermatid development
GO:0007289 IGI spermatid nucleus differentiation
GO:0008270 IEA zinc ion binding
GO:0009791 IGI post-embryonic development
GO:0016055 IGI Wnt signaling pathway
GO:0034504 IDA protein localization to nucleus
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044963 pygo1 pygopus homolog 1 (Drosophila) protein_coding Danio_rerio
ENSG00000171016 PYGO1 pygopus family PHD finger 1 protein_coding Homo_sapiens

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