C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059269-ENSDARG00000044963 CGP 7955 13:52216863-52277342
GeneTranscriptPositionBiotype
ENSDARG00000044963 (pygo1)
pygopus homolog 1 (Drosophila) 		ENSDART00000066097 (pygo1-201) 52269335-52277342 protein_coding
ENSDARG00000059269 (PRTG (2 of 3))
protogenin 		ENSDART00000082348 (PRTG (2 of 3)-201) 52216863-52257930 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004YO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036030-ENSMUSG00000034910 CGP 10090 9:72806874-72952181
GeneTranscriptPositionBiotype
ENSMUSG00000034910 (Pygo1)
pygopus 1 		ENSMUST00000038489 (Pygo1-001) 72925645-72952181 protein_coding
ENSMUSG00000036030 (Prtg)
protogenin homolog (Gallus gallus) 		ENSMUST00000055535 (Prtg-001) 72806874-72917291 protein_coding
ENSMUST00000184274 (Prtg-002) 72910627-72912305 retained_intron
ENSMUSG00000098471 (Gm27203)
predicted gene 27203 		ENSMUST00000183677 (Gm27203-001) 72827257-72827563 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YO_0001ENSDARG00000044963ENSDART00000066097ENSDARG00000059269ENSDART00000082348CIL_0004YO_0002ENSMUSG00000034910ENSMUST00000038489ENSMUSG00000036030ENSMUST00000055535ENSMUST00000184274ENSMUSG00000098471ENSMUST00000183677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YO_0001ENSDARG00000044963ENSDART00000066097ENSDARG00000059269ENSDART00000082348CIL_0004YO_0002ENSMUSG00000034910ENSMUST00000038489ENSMUSG00000036030ENSMUST00000055535ENSMUST00000184274ENSMUSG00000098471ENSMUST00000183677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044963 ENSDART00000066097 N/A N/A N/A 0.201±0.07 N/A N/A 0.521±0.14 0.545±0.00 0.363±0.00 N/A 0.352±0.00 N/A N/A N/A
ENSDARG00000059269 ENSDART00000082348 N/A N/A N/A 0.048±0.01 N/A N/A 0.047±0.00 0.053±0.00 0.186±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034910 ENSMUST00000038489 1.795±0.99 1.058±0.22 0.988±0.13 5.288±1.94 1.359±0.23 0.277±0.07 2.263±0.26 0.198±0.04 0.151±0.06 1.672±0.11 3.070±0.19 2.058±0.37 0.272±0.19 0.281±0.08
ENSMUSG00000036030 ENSMUST00000055535 0.316±0.19 0.042±0.01 0.072±0.01 0.233±0.07 0.274±0.10 0.030±0.01 0.029±0.01 0.043±0.01 0.040±0.04 0.032±0.01 0.037±0.01 0.188±0.08 0.766±0.40 0.058±0.02
ENSMUST00000184274 N/A 0.385±0.19 N/A N/A N/A 0.213±0.08 0.107±0.04 0.173±0.00 0.136±0.04 N/A 0.152±0.03 0.886±0.11 N/A N/A
ENSMUSG00000098471 ENSMUST00000183677 0.345±0.00 N/A N/A 0.118±0.08 0.310±0.04 N/A N/A 0.264±0.02 0.119±0.00 N/A N/A 1.066±0.00 N/A N/A

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