C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger RNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034949 Zfr2 10090 + 10:81233155-81252123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117798 Zfr2-001 81233155-81252123 protein_coding
  ENSMUST00000127526 Zfr2-005 81233176-81237577 processed_transcript
  ENSMUST00000128182 Zfr2-002 81233176-81242417 retained_intron
  ENSMUST00000132174 Zfr2-003 81233187-81252121 retained_intron
  ENSMUST00000137999 Zfr2-007 81248416-81251712 protein_coding
  ENSMUST00000144087 Zfr2-004 81233155-81237553 protein_coding
  ENSMUST00000148029 Zfr2-006 81249051-81250546 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117798ENSMUST00000128182ENSMUST00000132174ENSMUST00000144087ENSMUST00000148029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117798 1.899±1.03 6.673±0.46 5.220±1.18 20.674±2.95 1.961±0.36 1.851±0.49 0.427±0.22 0.813±0.26 0.115±0.07 1.332±0.35 0.488±0.20 6.828±1.14 0.768±0.24 2.263±0.79
ENSMUST00000128182 N/A N/A N/A N/A 1.074±0.00 N/A N/A N/A 0.044±0.04 N/A 0.107±0.00 N/A 0.334±0.09 N/A
ENSMUST00000132174 1.255±0.02 2.747±0.70 3.310±0.38 6.824±2.20 1.844±0.14 1.025±0.26 0.337±0.12 0.456±0.18 0.123±0.08 0.563±0.19 0.246±0.11 3.969±1.07 0.481±0.03 0.814±0.01
ENSMUST00000144087 N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.06 N/A N/A N/A N/A N/A
ENSMUST00000148029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.09 N/A 0.885±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006955 IEA immune response
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016740 IEA transferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071683 zfr2 zinc finger RNA binding protein 2 protein_coding Danio_rerio
ENSG00000105278 ZFR2 zinc finger RNA binding protein 2 protein_coding Homo_sapiens

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