C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger RNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105278 ZFR2 9606 - 19:3804024-3869032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262961 ZFR2-003 3804024-3869028 protein_coding
  ENST00000438164 ZFR2-002 3821427-3869028 nonsense_mediated_decay
  ENST00000439086 ZFR2-004 3851813-3869032 protein_coding
  ENST00000586578 ZFR2-001 3851805-3869015 nonsense_mediated_decay
  ENST00000587212 ZFR2-007 3833720-3869029 nonsense_mediated_decay
  ENST00000591712 ZFR2-008 3852440-3855590 protein_coding
  ENST00000591965 ZFR2-006 3831501-3869029 processed_transcript
  ENST00000592398 ZFR2-009 3852362-3869023 protein_coding
  ENST00000592807 ZFR2-005 3833541-3869029 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000262961ENST00000439086ENST00000586578ENST00000591712ENST00000592807
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000262961 0.058±0.00 N/A 0.809±0.00 0.042±0.00 N/A N/A 0.041±0.00 N/A 0.033±0.00 N/A N/A
ENST00000439086 N/A 0.292±0.00 0.921±0.01 N/A N/A 0.100±0.00 N/A N/A N/A 0.221±0.00 2.611±0.00
ENST00000586578 N/A N/A 0.976±0.00 N/A 0.254±0.00 N/A N/A N/A N/A N/A 2.711±0.00
ENST00000591712 N/A N/A N/A 0.236±0.00 N/A N/A 0.075±0.00 0.128±0.00 0.366±0.00 0.168±0.00 5.851±0.00
ENST00000592807 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QR CIL_0005QR_0002 CGP 19:3777970-3869032
CIL_0005QQ CIL_0005QQ_0002 CGP 19:3804024-3928079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071683 zfr2 zinc finger RNA binding protein 2 protein_coding Danio_rerio
ENSMUSG00000034949 Zfr2 zinc finger RNA binding protein 2 protein_coding Mus_musculus

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