C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dopey family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034973 Dopey1 10090 + 9:86467154-86555923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034987 Dopey1-201 86485407-86555806 protein_coding
  ENSMUST00000185297 Dopey1-007 86521141-86525085 protein_coding
  ENSMUST00000185840 Dopey1-011 86503644-86507560 retained_intron
  ENSMUST00000185919 Dopey1-005 86467214-86555804 nonsense_mediated_decay
  ENSMUST00000186290 Dopey1-001 86467170-86508284 retained_intron
  ENSMUST00000186418 Dopey1-012 86503936-86516390 retained_intron
  ENSMUST00000186715 Dopey1-016 86542821-86549117 retained_intron
  ENSMUST00000186841 Dopey1-010 86489598-86492499 retained_intron
  ENSMUST00000187348 Dopey1-008 86523492-86546490 retained_intron
  ENSMUST00000187427 Dopey1-018 86549617-86554630 retained_intron
  ENSMUST00000187607 Dopey1-002 86467211-86504297 retained_intron
  ENSMUST00000188675 Dopey1-017 86467211-86513024 protein_coding
  ENSMUST00000189564 Dopey1-014 86531577-86554625 retained_intron
  ENSMUST00000189817 Dopey1-013 86533003-86554630 nonsense_mediated_decay
  ENSMUST00000190407 Dopey1-009 86487264-86490069 retained_intron
  ENSMUST00000190834 Dopey1-006 86497030-86501000 retained_intron
  ENSMUST00000190906 Dopey1-003 86467179-86503173 retained_intron
  ENSMUST00000190957 Dopey1-004 86467154-86555923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000034987ENSMUST00000187427ENSMUST00000188675ENSMUST00000189564ENSMUST00000189817ENSMUST00000190957
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000034987 1.309±0.09 N/A N/A N/A N/A 0.371±0.00 N/A 0.890±0.15 N/A N/A 1.887±0.45 0.698±0.00
ENSMUST00000187427 5.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.607±0.00 N/A N/A
ENSMUST00000188675 N/A N/A N/A 3.306±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189564 N/A 4.559±0.71 6.674±0.00 4.379±1.11 3.746±0.00 2.406±0.63 5.418±0.00 N/A 5.677±0.68 1.708±0.21 3.712±0.00 N/A
ENSMUST00000189817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.580±0.00
ENSMUST00000190957 N/A N/A N/A N/A 2.049±0.08 N/A N/A 0.666±0.00 N/A N/A 1.374±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000673 CIL_000673_0002 CGP 9:86307306-86555923
CIL_000672 CIL_000672_0002 CGP 9:86467154-86571842

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019962 dopey1 dopey family member 1 protein_coding Danio_rerio
ENSG00000083097 DOPEY1 dopey family member 1 protein_coding Homo_sapiens

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