C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000673_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118420-ENSG00000083097 CGP 9606 6:82892398-83171350
GeneTranscriptPositionBiotype
ENSG00000013375 (PGM3)
phosphoglucomutase 3 		ENST00000283977 (PGM3-003) 83168528-83193266 protein_coding
ENST00000503094 (PGM3-007) 83188745-83193265 protein_coding
ENST00000504780 (PGM3-013) 83161150-83172013 nonsense_mediated_decay
ENST00000505470 (PGM3-010) 83182950-83193255 nonsense_mediated_decay
ENST00000506587 (PGM3-002) 83169123-83193914 protein_coding
ENST00000507404 (PGM3-011) 83174437-83176135 retained_intron
ENST00000507554 (PGM3-005) 83187025-83193936 protein_coding
ENST00000508748 (PGM3-006) 83188617-83193293 protein_coding
ENST00000509219 (PGM3-014) 83169521-83175982 protein_coding
ENST00000510258 (PGM3-009) 83181762-83193234 protein_coding
ENST00000512866 (PGM3-004) 83166130-83193231 protein_coding
ENST00000513973 (PGM3-001) 83164873-83193293 protein_coding
ENST00000515333 (PGM3-008) 83190510-83193248 retained_intron
ENST00000605602 (PGM3-015) 83188503-83188645 protein_coding
ENST00000616566 (PGM3-201) 83164873-83193293 protein_coding
ENSG00000083097 (DOPEY1)
dopey family member 1 		ENST00000237163 (DOPEY1-201) 83067666-83168471 protein_coding
ENST00000349129 (DOPEY1-002) 83067666-83168719 protein_coding
ENST00000369739 (DOPEY1-006) 83096729-83168331 protein_coding
ENST00000481979 (DOPEY1-005) 83153392-83154273 retained_intron
ENST00000484282 (DOPEY1-003) 83137676-83171350 processed_transcript
ENST00000493541 (DOPEY1-004) 83130214-83134480 retained_intron
ENST00000604380 (DOPEY1-001) 83122863-83128928 protein_coding
ENSG00000118420 (UBE3D)
ubiquitin protein ligase E3D 		ENST00000237186 (UBE3D-004) 82892398-83065841 nonsense_mediated_decay
ENST00000369746 (UBE3D-001) 83017182-83057969 nonsense_mediated_decay
ENST00000369747 (UBE3D-003) 82892398-83065841 protein_coding
ENST00000430071 (UBE3D-002) 82893025-83065839 nonsense_mediated_decay
ENST00000503942 (UBE3D-007) 82892467-82894033 processed_transcript
ENST00000505226 (UBE3D-006) 83036026-83065823 nonsense_mediated_decay
ENST00000509102 (UBE3D-005) 82892953-83065751 nonsense_mediated_decay
ENSG00000220091 (LAP3P1)
leucine aminopeptidase 3 pseudogene 1 		ENST00000403648 (LAP3P1-001) 82924829-82925122 processed_pseudogene
ENSG00000227215 (RP11-445L13__B.3)
 ENST00000451856 (RP11-445L13__B.3-001) 82932601-82938677 antisense
CIL_000673_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032415-ENSMUSG00000034973 CGP 10090 9:86307306-86555923
GeneTranscriptPositionBiotype
ENSMUSG00000032415 (Ube2cbp)
ubiquitin-conjugating enzyme E2C binding protein 		ENSMUST00000034986 (Ube2cbp-001) 86307306-86464950 protein_coding
ENSMUST00000121189 (Ube2cbp-003) 86307742-86464950 nonsense_mediated_decay
ENSMUSG00000034973 (Dopey1)
dopey family member 1 		ENSMUST00000034987 (Dopey1-201) 86485407-86555806 protein_coding
ENSMUST00000185297 (Dopey1-007) 86521141-86525085 protein_coding
ENSMUST00000185840 (Dopey1-011) 86503644-86507560 retained_intron
ENSMUST00000185919 (Dopey1-005) 86467214-86555804 nonsense_mediated_decay
ENSMUST00000186290 (Dopey1-001) 86467170-86508284 retained_intron
ENSMUST00000186418 (Dopey1-012) 86503936-86516390 retained_intron
ENSMUST00000186715 (Dopey1-016) 86542821-86549117 retained_intron
ENSMUST00000186841 (Dopey1-010) 86489598-86492499 retained_intron
ENSMUST00000187348 (Dopey1-008) 86523492-86546490 retained_intron
ENSMUST00000187427 (Dopey1-018) 86549617-86554630 retained_intron
ENSMUST00000187607 (Dopey1-002) 86467211-86504297 retained_intron
ENSMUST00000188675 (Dopey1-017) 86467211-86513024 protein_coding
ENSMUST00000189564 (Dopey1-014) 86531577-86554625 retained_intron
ENSMUST00000189817 (Dopey1-013) 86533003-86554630 nonsense_mediated_decay
ENSMUST00000190407 (Dopey1-009) 86487264-86490069 retained_intron
ENSMUST00000190834 (Dopey1-006) 86497030-86501000 retained_intron
ENSMUST00000190906 (Dopey1-003) 86467179-86503173 retained_intron
ENSMUST00000190957 (Dopey1-004) 86467154-86555923 protein_coding
ENSMUSG00000056131 (Pgm3)
phosphoglucomutase 3 		ENSMUST00000070064 (Pgm3-001) 86554377-86571827 protein_coding
ENSMUST00000072585 (Pgm3-003) 86555001-86571828 protein_coding
ENSMUST00000186193 (Pgm3-004) 86555681-86571793 retained_intron
ENSMUST00000187251 (Pgm3-002) 86556523-86571842 retained_intron
ENSMUST00000190924 (Pgm3-005) 86555256-86557940 retained_intron
ENSMUSG00000083731 (Gm16202)
predicted gene 16202 		ENSMUST00000117532 (Gm16202-001) 86316141-86316684 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000673_0001ENSG00000013375ENST00000283977ENST00000506587ENST00000512866ENST00000513973ENST00000616566ENSG00000083097ENST00000237163ENST00000349129ENST00000369739ENST00000484282ENSG00000118420ENST00000237186ENST00000369746ENST00000369747ENST00000430071ENST00000503942ENST00000505226ENST00000509102ENSG00000220091ENST00000403648ENSG00000227215ENST00000451856CIL_000673_0002ENSMUSG00000032415ENSMUST00000034986ENSMUST00000121189ENSMUSG00000034973ENSMUST00000034987ENSMUST00000187427ENSMUST00000188675ENSMUST00000189564ENSMUST00000189817ENSMUST00000190957ENSMUSG00000056131ENSMUST00000070064ENSMUST00000072585ENSMUST00000186193ENSMUSG00000083731ENSMUST00000117532
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013375 ENST00000283977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.611±0.33 N/A
ENST00000503094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.032±0.00 N/A N/A
ENST00000507404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512866 4.706±0.00 N/A N/A N/A 3.758±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513973 2.803±0.00 2.454±0.00 N/A 3.252±0.00 3.113±0.00 2.403±0.36 1.244±0.58 1.937±0.45 5.262±0.00 2.013±0.00 1.049±0.00 4.483±0.82 4.379±1.24 5.861±0.00
ENST00000515333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616566 N/A N/A 1.326±0.00 N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.287±0.00 N/A N/A N/A
ENSG00000083097 ENST00000237163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.505±0.00 N/A N/A
ENST00000349129 N/A N/A N/A N/A 1.588±0.00 1.563±0.00 N/A 1.277±0.00 N/A N/A 0.385±0.00 N/A N/A N/A
ENST00000369739 1.030±0.00 1.110±0.00 N/A 2.294±0.00 0.818±0.00 0.499±0.00 1.487±0.00 0.976±0.00 N/A N/A 0.527±0.00 1.882±0.41 1.575±0.00 4.061±0.48
ENST00000481979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484282 N/A 1.582±0.00 N/A 1.501±0.00 1.009±0.00 0.612±0.00 N/A 1.405±0.00 N/A 1.380±0.00 0.561±0.00 2.437±0.58 N/A 3.113±0.00
ENST00000493541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118420 ENST00000237186 N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A
ENST00000369746 N/A N/A 0.611±0.00 0.087±0.00 N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000369747 N/A N/A N/A 0.688±0.37 N/A 0.574±0.00 0.264±0.00 N/A N/A N/A N/A 0.959±0.37 0.713±0.14 0.347±0.00
ENST00000430071 0.372±0.00 N/A N/A N/A 0.815±0.04 N/A N/A 0.486±0.00 N/A 0.238±0.00 N/A N/A N/A 0.571±0.00
ENST00000503942 0.547±0.00 0.802±0.00 N/A 0.817±0.00 0.214±0.00 0.705±0.00 0.811±0.00 0.836±0.35 0.287±0.00 1.323±0.11 0.344±0.00 1.757±0.00 1.383±0.00 1.283±0.03
ENST00000505226 N/A N/A N/A 0.068±0.00 0.062±0.00 0.102±0.00 N/A 0.092±0.00 N/A 0.066±0.00 N/A N/A 0.123±0.00 0.438±0.00
ENST00000509102 0.597±0.00 1.100±0.00 N/A 0.645±0.00 N/A 0.947±0.00 0.630±0.00 0.968±0.59 0.696±0.22 0.770±0.27 0.990±0.00 0.500±0.00 0.383±0.02 0.437±0.00
ENSG00000220091 ENST00000403648 N/A N/A 2.045±0.00 0.562±0.00 3.811±0.00 N/A 0.209±0.00 N/A 0.376±0.00 N/A N/A N/A N/A N/A
ENSG00000227215 ENST00000451856 N/A N/A N/A N/A 0.165±0.08 N/A N/A N/A 0.088±0.00 N/A N/A 0.150±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032415 ENSMUST00000034986 1.107±0.75 0.475±0.22 1.225±0.22 1.960±0.09 0.641±0.23 0.651±0.25 0.465±0.08 0.996±0.18 1.305±0.43 0.457±0.02 1.002±0.23 0.911±0.56 0.653±0.44 0.582±0.30
ENSMUST00000121189 N/A 0.433±0.34 N/A N/A 0.801±0.18 0.858±0.36 N/A N/A 0.315±0.14 0.218±0.06 0.193±0.00 1.253±0.38 N/A 0.140±0.04
ENSMUSG00000034973 ENSMUST00000034987 N/A 1.309±0.09 N/A N/A N/A N/A 0.371±0.00 N/A 0.890±0.15 N/A N/A 1.887±0.45 0.698±0.00 N/A
ENSMUST00000185297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187427 N/A 5.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.607±0.00 N/A N/A N/A
ENSMUST00000187607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188675 N/A N/A N/A N/A 3.306±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189564 N/A N/A 4.559±0.71 6.674±0.00 4.379±1.11 3.746±0.00 2.406±0.63 5.418±0.00 N/A 5.677±0.68 1.708±0.21 3.712±0.00 N/A N/A
ENSMUST00000189817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.580±0.00 N/A
ENSMUST00000190407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190957 N/A N/A N/A N/A N/A 2.049±0.08 N/A N/A 0.666±0.00 N/A N/A 1.374±0.00 N/A N/A
ENSMUSG00000056131 ENSMUST00000070064 4.198±0.50 5.527±1.20 4.744±0.61 6.290±1.43 3.851±0.25 6.552±0.84 1.939±0.16 7.474±1.03 4.859±1.36 5.664±0.48 1.027±0.30 6.683±1.76 9.001±3.96 4.624±0.02
ENSMUST00000072585 N/A N/A N/A N/A N/A 4.873±0.34 N/A N/A N/A N/A N/A N/A 10.636±0.18 N/A
ENSMUST00000186193 N/A N/A N/A 5.873±0.00 N/A N/A N/A N/A 2.914±0.15 N/A N/A 6.472±1.94 8.749±2.26 5.410±0.00
ENSMUST00000187251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083731 ENSMUST00000117532 N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A 0.066±0.02 N/A N/A 0.141±0.00 0.036±0.00 N/A

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