C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated protein 53
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035394 Ccdc11 10090 + 18:74283090-74359986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114895 Ccdc11-001 74283090-74359986 protein_coding
  ENSMUST00000176435 Ccdc11-002 74283122-74359984 nonsense_mediated_decay
  ENSMUST00000176766 Ccdc11-004 74294958-74300207 processed_transcript
  ENSMUST00000177101 Ccdc11-003 74283162-74300194 nonsense_mediated_decay
  ENSMUST00000177407 Ccdc11-005 74348986-74359930 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114895ENSMUST00000176435ENSMUST00000176766ENSMUST00000177101ENSMUST00000177407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114895 0.033±0.00 N/A 0.123±0.00 0.178±0.10 0.053±0.00 N/A 0.049±0.03 0.054±0.00 0.032±0.02 0.170±0.03 0.045±0.03 2.144±3.00 0.481±0.49 108.439±179.15
ENSMUST00000176435 N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A 0.018±0.01 N/A N/A 0.210±0.07 0.092±0.00 N/A
ENSMUST00000176766 N/A N/A N/A N/A 0.107±0.00 0.208±0.06 0.119±0.04 N/A N/A 0.495±0.15 0.217±0.05 0.429±0.11 N/A N/A
ENSMUST00000177101 N/A 0.152±0.05 N/A N/A N/A N/A N/A N/A 0.006±0.00 0.213±0.06 N/A 0.348±0.14 N/A N/A
ENSMUST00000177407 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.347±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F3 CIL_0001F3_0002 CGP 18:74283090-74771493

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069762 ccdc11 coiled-coil domain containing 11 protein_coding Danio_rerio
ENSG00000172361 CCDC11 cilia and flagella associated protein 53 protein_coding Homo_sapiens

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