C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stabilin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035459 Stab2 10090 - 10:86841198-87008025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035288 Stab2-001 86841198-87008025 protein_coding
  ENSMUST00000099390 Stab2-002 86992512-87008022 processed_transcript
  ENSMUST00000159023 Stab2-007 86871859-86878958 retained_intron
  ENSMUST00000159118 Stab2-006 86873828-86885749 retained_intron
  ENSMUST00000160580 Stab2-003 86918662-86940640 processed_transcript
  ENSMUST00000161560 Stab2-004 86841321-86891606 nonsense_mediated_decay
  ENSMUST00000163045 Stab2-005 86990829-87008012 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035288ENSMUST00000160580ENSMUST00000161560
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035288 0.079±0.04 0.057±0.03 0.232±0.02 0.025±0.00 1.178±0.20 0.051±0.01 N/A 0.510±0.06 3.524±1.18 0.140±0.05 0.274±0.00 0.334±0.21 1.954±0.90 0.466±0.13
ENSMUST00000160580 N/A 0.188±0.08 N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161560 N/A 0.127±0.11 0.972±0.24 0.016±0.00 N/A 0.100±0.04 N/A N/A 4.267±0.73 0.294±0.00 1.761±0.34 0.360±0.11 1.301±0.48 1.926±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005041 IEA low-density lipoprotein receptor activity
GO:0005044 IEA scavenger receptor activity
GO:0005540 ISS hyaluronic acid binding
GO:0005737 IEA cytoplasm
GO:0005887 IEA integral component of plasma membrane
GO:0006897 ISS endocytosis
GO:0007155 IEA cell adhesion
GO:0009897 ISS external side of plasma membrane
GO:0010468 IEA regulation of gene expression
GO:0030169 IEA low-density lipoprotein particle binding
GO:0030193 IEA regulation of blood coagulation
GO:0042742 IEA defense response to bacterium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045748 stab2 stabilin 2 protein_coding Danio_rerio
ENSG00000136011 STAB2 stabilin 2 protein_coding Homo_sapiens

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