C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stabilin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035288 Stab2-001 ENSMUSG00000035459 10090 - 10:86841198-87008025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035288
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035288 0.079±0.04 0.057±0.03 0.232±0.02 0.025±0.00 1.178±0.20 0.051±0.01 0.510±0.06 3.524±1.18 0.140±0.05 0.274±0.00 0.334±0.21 1.954±0.90 0.466±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005041 IEA low-density lipoprotein receptor activity
GO:0005044 IEA scavenger receptor activity
GO:0005540 ISS hyaluronic acid binding
GO:0005737 IEA cytoplasm
GO:0005887 IEA integral component of plasma membrane
GO:0006897 ISS endocytosis
GO:0007155 IEA cell adhesion
GO:0009897 ISS external side of plasma membrane
GO:0010468 IEA regulation of gene expression
GO:0030169 IEA low-density lipoprotein particle binding
GO:0030193 IEA regulation of blood coagulation
GO:0042742 IEA defense response to bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000388887 STAB2-001 protein_coding Homo_sapiens 0 6292
ENST00000548579 STAB2-005 retained_intron Homo_sapiens 0 281

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