C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipid phosphate phosphatase-related protein type 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035835 BC005764 10090 - 10:79860475-79874634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092325 BC005764-001 79864781-79874634 protein_coding
  ENSMUST00000113452 BC005764-003 79864781-79874366 retained_intron
  ENSMUST00000163111 BC005764-006 79866854-79874389 processed_transcript
  ENSMUST00000165601 BC005764-005 79866438-79874408 protein_coding
  ENSMUST00000166023 BC005764-008 79867459-79874370 protein_coding
  ENSMUST00000166057 BC005764-004 79864781-79874570 retained_intron
  ENSMUST00000167250 BC005764-002 79860475-79874570 protein_coding
  ENSMUST00000167707 BC005764-007 79866908-79874399 protein_coding
  ENSMUST00000167897 BC005764-009 79866432-79874224 protein_coding
  ENSMUST00000170910 BC005764-010 79866412-79867281 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryENSMUST00000092325ENSMUST00000113452ENSMUST00000165601ENSMUST00000166057ENSMUST00000167250
Transcript ID Brain Breast Colon Ovary
ENSMUST00000092325 55.380±32.95 N/A N/A N/A
ENSMUST00000113452 73.623±42.29 N/A N/A N/A
ENSMUST00000165601 260.697±0.00 N/A N/A N/A
ENSMUST00000166057 164.765±74.51 N/A N/A N/A
ENSMUST00000167250 N/A 11.848±0.89 9.671±1.01 23.594±3.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_00051Q CIL_00051Q_0002 CGP 10:79821021-79864771
CIL_00008B CIL_00008B_0002 CGP 10:79854427-79874634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008195 IEA phosphatidate phosphatase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010144 lppr3a lipid phosphate phosphatase-related protein type 3a protein_coding Danio_rerio
ENSDARG00000028552 lppr3b lipid phosphate phosphatase-related protein type 3b protein_coding Danio_rerio
ENSG00000129951 LPPR3 Lipid phosphate phosphatase-related protein type 3 protein_coding Homo_sapiens

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