C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035845 Alg12 10090 - 15:88805244-88819318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043087 Alg12-002 88805245-88819285 protein_coding
  ENSMUST00000159328 Alg12-003 88814608-88819092 protein_coding
  ENSMUST00000160222 Alg12-004 88805244-88816171 retained_intron
  ENSMUST00000162183 Alg12-001 88805244-88819318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043087ENSMUST00000159328ENSMUST00000160222ENSMUST00000162183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043087 2.484±0.85 N/A N/A N/A 2.224±0.61 2.297±0.00 N/A N/A 0.941±0.25 N/A 0.674±0.04 4.378±1.43 1.024±0.52 3.410±1.60
ENSMUST00000159328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.815±0.00 4.531±0.00
ENSMUST00000160222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.871±0.00
ENSMUST00000162183 5.912±1.20 9.169±2.24 4.741±0.31 2.300±0.89 7.172±1.72 10.024±2.14 3.888±0.41 8.393±1.02 4.215±1.40 5.603±0.53 1.129±0.26 9.329±3.87 6.052±2.94 9.114±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000095 CIL_000095_0002 CGP 15:88751660-88819318
CIL_0007HV CIL_0007HV_0002 CGP 15:88805244-88826681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006487 IEA protein N-linked glycosylation
GO:0006488 ISA dolichol-linked oligosaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0052917 IEA dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041199 alg12 asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase) protein_coding Danio_rerio
ENSG00000182858 ALG12 ALG12, alpha-1,6-mannosyltransferase protein_coding Homo_sapiens

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