C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 12 (alpha-1,6-mannosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162183 Alg12-001 ENSMUSG00000035845 10090 - 15:88805244-88819318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162183 5.912±1.20 9.169±2.24 4.741±0.31 2.300±0.89 7.172±1.72 10.024±2.14 3.888±0.41 8.393±1.02 4.215±1.40 5.603±0.53 1.129±0.26 9.329±3.87 6.052±2.94 9.114±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000095 CIL_000095_0002 CGP 15:88751660-88819318
CIL_0007HV CIL_0007HV_0002 CGP 15:88805244-88826681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006487 IEA protein N-linked glycosylation
GO:0006488 ISA dolichol-linked oligosaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0052917 IEA dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330817 ALG12-001 protein_coding Homo_sapiens 0 1062
ENST00000492791 ALG12-002 nonsense_mediated_decay Homo_sapiens 0 381

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