C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 5031439G07 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036046 5031439G07Rik 10090 - 15:84943936-84988551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047144 5031439G07Rik-001 84943936-84988000 protein_coding
  ENSMUST00000124308 5031439G07Rik-002 84948000-84960983 retained_intron
  ENSMUST00000165743 5031439G07Rik-201 84945720-84987971 protein_coding
  ENSMUST00000170863 5031439G07Rik-003 84955688-84988551 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047144ENSMUST00000124308ENSMUST00000165743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047144 5.574±1.43 6.577±0.86 9.518±0.54 12.424±5.62 9.272±0.60 5.361±0.80 5.569±0.63 8.863±0.96 2.602±1.52 6.689±0.51 28.973±4.87 10.372±1.80 3.382±0.36 N/A
ENSMUST00000124308 1.645±0.39 1.536±0.14 1.688±0.27 5.426±3.27 2.377±0.25 1.017±0.07 N/A N/A 0.345±0.00 1.393±0.14 N/A 2.961±0.19 2.865±0.47 3.298±0.00
ENSMUST00000165743 3.764±0.41 3.082±1.18 N/A 6.237±0.00 5.670±1.25 2.438±1.12 N/A 4.132±0.86 1.011±0.54 2.860±0.36 14.389±2.02 6.310±1.80 5.052±3.48 11.363±4.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V4 CIL_0000V4_0003 CGP 15:84923428-84988551
CIL_00054J CIL_00054J_0002 CGP 15:84943936-85022560

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068830 zgc:172139 zgc:172139 protein_coding Danio_rerio
ENSG00000100364 KIAA0930 KIAA0930 protein_coding Homo_sapiens

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