C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036591 Arhgap21 10090 - 2:20847919-20968881 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114594 Arhgap21-001 20847919-20968881 protein_coding
  ENSMUST00000125783 Arhgap21-015 20914800-20968625 protein_coding
  ENSMUST00000127512 Arhgap21-008 20850244-20859888 retained_intron
  ENSMUST00000131394 Arhgap21-002 20967598-20968484 processed_transcript
  ENSMUST00000131542 Arhgap21-011 20849952-20853247 retained_intron
  ENSMUST00000136241 Arhgap21-009 20853041-20855705 processed_transcript
  ENSMUST00000140230 Arhgap21-004 20889900-20943419 protein_coding
  ENSMUST00000141298 Arhgap21-012 20848594-20968526 protein_coding
  ENSMUST00000143491 Arhgap21-010 20850380-20854631 retained_intron
  ENSMUST00000154230 Arhgap21-201 20847919-20967721 protein_coding
  ENSMUST00000154657 Arhgap21-007 20859429-20861102 retained_intron
  ENSMUST00000156142 Arhgap21-006 20886358-20914694 processed_transcript
  ENSMUST00000173194 Arhgap21-013 20847940-20967720 protein_coding
  ENSMUST00000173566 Arhgap21-017 20967623-20968832 processed_transcript
  ENSMUST00000173654 Arhgap21-016 20967690-20968880 processed_transcript
  ENSMUST00000173784 Arhgap21-018 20858915-20871399 protein_coding
  ENSMUST00000174584 Arhgap21-005 20850043-20883229 nonsense_mediated_decay
  ENSMUST00000174825 Arhgap21-014 20853042-20859881 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114594ENSMUST00000131542ENSMUST00000141298ENSMUST00000154230ENSMUST00000173194ENSMUST00000173654ENSMUST00000173784ENSMUST00000174584ENSMUST00000174825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114594 N/A 1.460±0.31 0.928±0.00 6.863±3.67 N/A N/A 2.277±0.71 N/A N/A N/A 0.394±0.10 N/A N/A N/A
ENSMUST00000131542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.851±0.00
ENSMUST00000141298 N/A N/A N/A 11.483±0.15 N/A N/A 1.409±0.00 N/A N/A N/A 0.959±0.25 5.439±0.00 4.545±0.00 0.255±0.00
ENSMUST00000154230 N/A N/A N/A 8.076±4.90 N/A N/A 1.770±0.77 N/A N/A N/A 0.583±0.06 N/A N/A N/A
ENSMUST00000173194 1.994±0.57 3.167±1.24 3.676±1.64 20.831±11.33 3.202±0.89 2.863±0.00 2.275±0.82 1.975±0.43 3.324±1.98 6.796±1.32 0.849±0.34 4.769±4.49 11.436±5.62 0.429±0.17
ENSMUST00000173654 N/A 13.895±3.47 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.903±0.00 N/A
ENSMUST00000174584 N/A N/A N/A 20.800±0.00 N/A N/A N/A N/A N/A N/A N/A 4.632±0.00 4.936±0.00 0.203±0.00
ENSMUST00000174825 N/A N/A N/A 87.433±0.00 N/A N/A N/A N/A N/A N/A N/A 40.984±0.00 71.210±13.42 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D1 CIL_0002D1_0002 CGP 2:19909780-20968881

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005794 IEA Golgi apparatus
GO:0007030 IEA Golgi organization
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051683 IEA establishment of Golgi localization
GO:0051684 IEA maintenance of Golgi location
GO:0072384 IEA organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075328 arhgap21a Rho GTPase activating protein 21a protein_coding Danio_rerio
ENSG00000107863 ARHGAP21 Rho GTPase activating protein 21 protein_coding Homo_sapiens

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