C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107863 ARHGAP21 9606 - 10:24583609-24723668 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320481 ARHGAP21-201 24584387-24721990 protein_coding
  ENST00000376410 ARHGAP21-012 24596689-24721927 protein_coding
  ENST00000396432 ARHGAP21-001 24583609-24723668 protein_coding
  ENST00000416305 ARHGAP21-007 24629524-24721866 protein_coding
  ENST00000418033 ARHGAP21-010 24586033-24595960 protein_coding
  ENST00000418325 ARHGAP21-005 24594970-24596043 protein_coding
  ENST00000446003 ARHGAP21-003 24596822-24723240 protein_coding
  ENST00000463892 ARHGAP21-011 24722012-24722760 processed_transcript
  ENST00000472150 ARHGAP21-008 24670339-24723247 processed_transcript
  ENST00000476067 ARHGAP21-017 24607444-24607878 retained_intron
  ENST00000476499 ARHGAP21-002 24629014-24722034 retained_intron
  ENST00000477190 ARHGAP21-016 24585920-24590042 retained_intron
  ENST00000482792 ARHGAP21-015 24591345-24595036 retained_intron
  ENST00000483114 ARHGAP21-014 24620879-24622842 retained_intron
  ENST00000486374 ARHGAP21-004 24583614-24621369 retained_intron
  ENST00000493154 ARHGAP21-006 24597469-24607871 processed_transcript
  ENST00000612832 ARHGAP21-202 24583609-24723668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320481ENST00000376410ENST00000396432ENST00000418033ENST00000446003ENST00000486374ENST00000493154ENST00000612832
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320481 N/A 1.588±0.00 N/A N/A 3.280±0.00 N/A 1.438±0.00 3.178±0.00 2.744±0.00 N/A 4.425±0.00 N/A N/A
ENST00000376410 N/A 2.914±0.00 N/A 6.860±0.00 N/A N/A N/A N/A N/A 3.034±0.00 7.504±0.00 N/A N/A
ENST00000396432 N/A N/A 12.456±4.08 2.951±0.42 2.600±0.74 2.823±2.06 N/A N/A N/A 0.805±0.00 1.408±0.00 2.361±0.24 N/A
ENST00000418033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.081±0.00 N/A
ENST00000446003 N/A N/A 15.811±0.00 N/A 5.010±0.00 4.488±0.00 1.341±0.00 7.657±0.00 8.785±0.00 2.464±0.00 4.419±0.00 N/A N/A
ENST00000486374 0.482±0.00 0.643±0.00 6.144±0.00 N/A 2.566±0.00 N/A N/A 1.927±0.00 2.155±0.00 N/A N/A N/A N/A
ENST00000493154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.146±0.00
ENST00000612832 N/A N/A N/A N/A 0.719±0.00 N/A N/A N/A N/A N/A N/A N/A 1.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D1 CIL_0002D1_0001 CGP 10:23694746-24723668
CIL_00077X CIL_00077X_0002 CGP 10:24583609-24952604

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005794 IDA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0007030 IMP Golgi organization
GO:0007165 IEA signal transduction
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043547 IEA positive regulation of GTPase activity
GO:0051683 IDA establishment of Golgi localization
GO:0051684 IMP maintenance of Golgi location
GO:0072384 IMP organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075328 arhgap21a Rho GTPase activating protein 21a protein_coding Danio_rerio
ENSMUSG00000036591 Arhgap21 Rho GTPase activating protein 21 protein_coding Mus_musculus

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