C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: jumonji domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036819 Jmjd4 10090 + 11:59450045-59458567 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045279 Jmjd4-002 59450045-59458473 protein_coding
  ENSMUST00000108777 Jmjd4-001 59450045-59458473 protein_coding
  ENSMUST00000126158 Jmjd4-004 59450121-59456106 retained_intron
  ENSMUST00000147163 Jmjd4-003 59450045-59458567 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000108777ENSMUST00000147163
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108777 2.314±0.00 3.910±0.00 N/A 2.340±0.48 1.807±0.35 2.174±0.02 1.986±0.62 2.331±0.75 1.506±0.32 3.349±1.34 2.071±0.15 N/A
ENSMUST00000147163 N/A 4.675±0.35 1.925±0.00 2.687±0.07 1.749±0.20 N/A 1.659±0.07 2.552±0.00 1.482±0.16 4.065±0.66 1.716±0.00 1.473±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C4 CIL_0000C4_0003 CGP 11:59407134-59458567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058995 jmjd4 jumonji domain containing 4 protein_coding Danio_rerio
ENSG00000081692 JMJD4 jumonji domain containing 4 protein_coding Homo_sapiens

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