C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 26
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036885 Arhgef26 10090 + 3:62338344-62462221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079300 Arhgef26-001 62338344-62462221 protein_coding
  ENSMUST00000159746 Arhgef26-003 62341101-62380991 processed_transcript
  ENSMUST00000161057 Arhgef26-005 62419668-62460212 protein_coding
  ENSMUST00000161493 Arhgef26-004 62340390-62378118 retained_intron
  ENSMUST00000163008 Arhgef26-002 62338999-62379719 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079300ENSMUST00000161057ENSMUST00000163008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079300 1.869±1.47 0.301±0.07 3.376±0.25 2.597±0.32 0.743±0.06 2.388±0.24 0.319±0.02 0.673±0.09 3.076±2.58 13.565±1.63 0.156±0.04 1.094±0.33 0.759±0.44 0.216±0.06
ENSMUST00000161057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.03 N/A N/A N/A
ENSMUST00000163008 N/A 1.205±0.18 N/A N/A 1.352±0.58 3.614±0.49 N/A 0.342±0.00 1.788±0.01 13.863±2.36 N/A 2.137±0.54 N/A 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0002 CGP 3:62338344-62507004

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001886 IMP endothelial cell morphogenesis
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0097178 IMP ruffle assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000114790 ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 protein_coding Homo_sapiens

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