C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079300 Arhgef26-001 ENSMUSG00000036885 10090 + 3:62338344-62462221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079300 1.869±1.47 0.301±0.07 3.376±0.25 2.597±0.32 0.743±0.06 2.388±0.24 0.319±0.02 0.673±0.09 3.076±2.58 13.565±1.63 0.156±0.04 1.094±0.33 0.759±0.44 0.216±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0002 CGP 3:62338344-62507004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001886 IMP endothelial cell morphogenesis
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0097178 IMP ruffle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356448 ARHGEF26-001 protein_coding Homo_sapiens 0 2595
ENST00000465093 ARHGEF26-002 protein_coding Homo_sapiens 0 2595
ENST00000465817 ARHGEF26-004 protein_coding Homo_sapiens 0 920
ENST00000483068 ARHGEF26-005 processed_transcript Homo_sapiens 0 841
ENST00000496710 ARHGEF26-003 nonsense_mediated_decay Homo_sapiens 0 2252
ENST00000614308 ARHGEF26-201 protein_coding Homo_sapiens 0 2595
ENST00000618535 ARHGEF26-202 protein_coding Homo_sapiens 0 2595

Loading