C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037017 Zscan21 10090 + 5:138116903-138134265 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062350 Zscan21-003 138116903-138134213 protein_coding
  ENSMUST00000080732 Zscan21-004 138116937-138134214 protein_coding
  ENSMUST00000110959 Zscan21-005 138117041-138134216 protein_coding
  ENSMUST00000110960 Zscan21-002 138116937-138134265 protein_coding
  ENSMUST00000110961 Zscan21-001 138116916-138134265 protein_coding
  ENSMUST00000136425 Zscan21-006 138116982-138125540 protein_coding
  ENSMUST00000142185 Zscan21-007 138116980-138133247 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062350ENSMUST00000080732ENSMUST00000110959ENSMUST00000110960ENSMUST00000110961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062350 1.573±0.57 0.922±0.00 3.376±0.84 8.544±1.15 1.784±0.50 1.770±0.39 0.912±0.59 1.767±0.26 1.996±0.69 1.335±0.13 1.792±0.56 3.905±2.29 3.047±0.13 7.604±1.36
ENSMUST00000080732 1.996±0.12 3.702±0.86 N/A 2.500±0.00 1.022±0.44 2.332±0.67 1.430±0.00 1.537±0.00 1.355±0.52 3.030±0.00 2.186±0.00 5.169±2.14 6.805±2.42 7.720±0.54
ENSMUST00000110959 N/A N/A N/A 0.396±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.133±0.00
ENSMUST00000110960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.900±0.00 N/A 7.795±0.97 N/A
ENSMUST00000110961 2.107±0.92 1.613±0.40 5.482±0.86 16.855±0.75 2.057±0.41 1.766±0.80 2.181±0.64 3.460±0.59 3.128±1.40 2.566±1.00 3.691±0.93 4.359±3.32 3.123±1.20 17.616±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0002F6 CIL_0002F6_0002 CGP 5:138085084-138134265
CIL_0005LO CIL_0005LO_0002 CGP 5:138116903-138155744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048477 IEA oogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166529 ZSCAN21 zinc finger and SCAN domain containing 21 protein_coding Homo_sapiens

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