C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110961 Zscan21-001 ENSMUSG00000037017 10090 + 5:138116916-138134265 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110961 2.107±0.92 1.613±0.40 5.482±0.86 16.855±0.75 2.057±0.41 1.766±0.80 2.181±0.64 3.460±0.59 3.128±1.40 2.566±1.00 3.691±0.93 4.359±3.32 3.123±1.20 17.616±2.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0002F6 CIL_0002F6_0002 CGP 5:138085084-138134265
CIL_0005LO CIL_0005LO_0002 CGP 5:138116903-138155744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048477 IEA oogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292450 ZSCAN21-001 protein_coding Homo_sapiens 0 1081
ENST00000322734 ZNF660-001 protein_coding Homo_sapiens 0.00000000002 77
ENST00000360187 ZNF605-001 protein_coding Homo_sapiens 0.00000008 66
ENST00000392321 ZNF605-002 protein_coding Homo_sapiens 0.00000005 66
ENST00000413658 ZNF3-006 protein_coding Homo_sapiens 0 628
ENST00000438937 ZSCAN21-002 protein_coding Homo_sapiens 0 388
ENST00000456748 ZSCAN21-004 protein_coding Homo_sapiens 0 588
ENST00000477297 ZSCAN21-003 processed_transcript Homo_sapiens 0 427
ENST00000543588 ZSCAN21-201 protein_coding Homo_sapiens 0 793

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