C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037101 Ttc29 10090 + 8:78213297-78394326 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049395 Ttc29-001 78213342-78394326 protein_coding
  ENSMUST00000109902 Ttc29-201 78218794-78393683 protein_coding
  ENSMUST00000117845 Ttc29-002 78213297-78220975 protein_coding
  ENSMUST00000124713 Ttc29-007 78390982-78393774 processed_transcript
  ENSMUST00000126172 Ttc29-005 78213302-78220833 protein_coding
  ENSMUST00000137424 Ttc29-004 78213315-78218018 processed_transcript
  ENSMUST00000143157 Ttc29-006 78251491-78276829 retained_intron
  ENSMUST00000156432 Ttc29-003 78213350-78217962 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000049395ENSMUST00000109902ENSMUST00000117845ENSMUST00000124713ENSMUST00000126172ENSMUST00000143157ENSMUST00000156432
Transcript ID Adipose Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000049395 0.040±0.00 0.094±0.00 0.037±0.00 N/A N/A 0.512±0.00 0.631±0.25 0.008±0.00 12.184±3.19
ENSMUST00000109902 0.132±0.02 0.058±0.00 0.045±0.00 0.062±0.03 0.005±0.00 0.574±0.00 1.299±1.21 0.041±0.03 52.664±25.86
ENSMUST00000117845 N/A 0.287±0.00 N/A N/A N/A N/A 1.148±0.27 N/A 40.137±10.49
ENSMUST00000124713 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 55.681±0.00
ENSMUST00000126172 N/A N/A 0.142±0.00 N/A N/A N/A 0.963±0.00 N/A N/A
ENSMUST00000143157 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A
ENSMUST00000156432 0.236±0.00 N/A 0.082±0.00 N/A N/A 2.510±0.00 1.088±0.34 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FD CIL_0008FD_0002 VISTA 8:77687315-78289135
CIL_0008Y8 CIL_0008Y8_0002 VISTA 8:77701608-78302512
CIL_0007K4 CIL_0007K4_0002 UCNEbase 8:78112601-78725703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058885 TTC29 tetratricopeptide repeat domain 29 protein_coding Danio_rerio
ENSG00000137473 TTC29 tetratricopeptide repeat domain 29 protein_coding Homo_sapiens

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