C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008FD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm172 VISTA 9606 4:146873319-147475305
GeneTranscriptPositionBiotype
ENSG00000137473 (TTC29)
tetratricopeptide repeat domain 29 		ENST00000325106 (TTC29-201) 146707028-146945882 protein_coding
ENST00000398886 (TTC29-202) 146707029-146945828 protein_coding
ENST00000502319 (TTC29-007) 146939817-146945879 protein_coding
ENST00000504272 (TTC29-005) 146707169-146764187 processed_transcript
ENST00000504425 (TTC29-002) 146707033-146945882 protein_coding
ENST00000506019 (TTC29-004) 146803476-146813030 processed_transcript
ENST00000508306 (TTC29-003) 146707032-146945833 nonsense_mediated_decay
ENST00000513335 (TTC29-001) 146706638-146945832 protein_coding
ENST00000515315 (TTC29-006) 146909223-146945048 protein_coding
ENSG00000221369 (MIR548G)
microRNA 548g 		ENST00000408442 (MIR548G-201) 147344629-147344717 miRNA
ENSG00000241281 (RP11-364M6.1)
 ENST00000473673 (RP11-364M6.1-001) 147425974-147426351 processed_pseudogene
ENSG00000248346 (RP11-292D4.1)
 ENST00000512752 (RP11-292D4.1-002) 146973858-146975457 lincRNA
ENST00000513711 (RP11-292D4.1-001) 146957438-146975314 lincRNA
ENSG00000248764 (RP11-292D4.2)
 ENST00000515530 (RP11-292D4.2-001) 146934001-146945471 antisense
ENSG00000249004 (PRMT5P1)
protein arginine methyltransferase 5 pseudogene 1 		ENST00000514351 (PRMT5P1-001) 147458724-147459321 processed_pseudogene
ENSG00000260090 (RP11-292D4.3)
 ENST00000565538 (RP11-292D4.3-001) 147005492-147009145 lincRNA
ENSG00000279376 (RP11-292D4.4)
 ENST00000623012 (RP11-292D4.4-001) 147025914-147030072 TEC
CIL_0008FD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm172 VISTA 10090 8:77687315-78289135
GeneTranscriptPositionBiotype
ENSMUSG00000031616 (Ednra)
endothelin receptor type A 		ENSMUST00000034029 (Ednra-001) 77663031-77724436 protein_coding
ENSMUST00000146561 (Ednra-002) 77669694-77724464 retained_intron
ENSMUSG00000037101 (Ttc29)
tetratricopeptide repeat domain 29 		ENSMUST00000049395 (Ttc29-001) 78213342-78394326 protein_coding
ENSMUST00000109902 (Ttc29-201) 78218794-78393683 protein_coding
ENSMUST00000117845 (Ttc29-002) 78213297-78220975 protein_coding
ENSMUST00000124713 (Ttc29-007) 78390982-78393774 processed_transcript
ENSMUST00000126172 (Ttc29-005) 78213302-78220833 protein_coding
ENSMUST00000137424 (Ttc29-004) 78213315-78218018 processed_transcript
ENSMUST00000143157 (Ttc29-006) 78251491-78276829 retained_intron
ENSMUST00000156432 (Ttc29-003) 78213350-78217962 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FD_0001ENSG00000137473ENST00000325106ENST00000398886ENST00000502319ENST00000504272ENST00000504425ENST00000506019ENST00000508306ENST00000513335ENST00000515315ENSG00000221369ENST00000408442ENSG00000241281ENST00000473673ENSG00000248346ENST00000512752ENST00000513711ENSG00000248764ENST00000515530ENSG00000249004ENST00000514351ENSG00000260090ENST00000565538ENSG00000279376ENST00000623012CIL_0008FD_0002ENSMUSG00000031616ENSMUST00000034029ENSMUST00000146561ENSMUSG00000037101ENSMUST00000049395ENSMUST00000109902ENSMUST00000117845ENSMUST00000124713ENSMUST00000126172ENSMUST00000137424ENSMUST00000143157ENSMUST00000156432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FD_0001ENSG00000137473ENST00000325106ENST00000398886ENST00000502319ENST00000504425ENST00000513335ENSG00000221369ENST00000408442ENSG00000241281ENST00000473673ENSG00000248346ENST00000512752ENST00000513711ENSG00000248764ENST00000515530ENSG00000249004ENST00000514351ENSG00000260090ENST00000565538ENSG00000279376ENST00000623012CIL_0008FD_0002ENSMUSG00000031616ENSMUST00000034029ENSMUST00000146561ENSMUSG00000037101ENSMUST00000049395ENSMUST00000109902ENSMUST00000117845ENSMUST00000124713ENSMUST00000126172ENSMUST00000143157ENSMUST00000156432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137473 ENST00000325106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.091±0.00
ENST00000398886 0.007±0.00 0.018±0.00 0.203±0.00 0.229±0.01 0.129±0.00 N/A N/A N/A N/A 3.700±0.00 N/A 1.096±1.02 0.008±0.00 43.385±7.30
ENST00000502319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 0.108±0.00 N/A
ENST00000504272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504425 0.049±0.00 0.027±0.00 N/A N/A 0.072±0.00 N/A N/A 0.059±0.00 N/A 1.933±0.00 N/A 0.010±0.00 0.003±0.00 8.351±0.00
ENST00000506019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513335 N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A 0.690±0.00 N/A 0.272±0.25 N/A N/A
ENST00000515315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221369 ENST00000408442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.419±0.00
ENSG00000241281 ENST00000473673 0.037±0.00 0.038±0.00 N/A 0.040±0.00 0.076±0.00 0.175±0.00 0.035±0.00 N/A 0.068±0.00 0.139±0.00 0.567±0.00 N/A N/A 0.104±0.00
ENSG00000248346 ENST00000512752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00
ENST00000513711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.10
ENSG00000248764 ENST00000515530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.418±0.35
ENSG00000249004 ENST00000514351 N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260090 ENST00000565538 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.012±0.01
ENSG00000279376 ENST00000623012 N/A N/A 0.067±0.00 0.018±0.00 N/A N/A 0.012±0.00 0.160±0.00 0.037±0.00 0.008±0.00 N/A 0.011±0.00 N/A 0.013±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031616 ENSMUST00000034029 21.200±13.64 5.591±0.33 3.208±0.53 2.762±1.68 11.415±1.33 4.644±0.59 14.112±0.93 2.212±0.38 1.893±0.90 28.339±3.16 0.672±0.09 13.712±2.29 1.339±0.56 0.921±0.31
ENSMUST00000146561 N/A 0.839±0.10 N/A N/A 1.461±0.00 0.918±0.14 N/A N/A N/A 4.243±0.34 0.109±0.00 12.348±4.25 N/A 1.022±0.04
ENSMUSG00000037101 ENSMUST00000049395 0.040±0.00 N/A N/A 0.094±0.00 N/A N/A 0.037±0.00 N/A N/A 0.512±0.00 N/A 0.631±0.25 0.008±0.00 12.184±3.19
ENSMUST00000109902 0.132±0.02 N/A N/A 0.058±0.00 N/A N/A 0.045±0.00 0.062±0.03 0.005±0.00 0.574±0.00 N/A 1.299±1.21 0.041±0.03 52.664±25.86
ENSMUST00000117845 N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A 1.148±0.27 N/A 40.137±10.49
ENSMUST00000124713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 55.681±0.00
ENSMUST00000126172 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A 0.963±0.00 N/A N/A
ENSMUST00000137424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A
ENSMUST00000156432 0.236±0.00 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A 2.510±0.00 N/A 1.088±0.34 N/A N/A

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