C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037149 Ddx1 10090 - 12:13219308-13249213 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071103 Ddx1-201 13219308-13249213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071103 15.480±1.39 3.324±0.37 32.877±1.31 53.601±27.79 8.784±3.53 7.078±2.70 12.077±1.00 13.866±2.10 22.371±14.56 10.198±1.91 36.436±1.35 19.006±22.98 49.530±34.87 73.758±50.47

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0003712 ISS transcription cofactor activity
GO:0003725 IDA double-stranded RNA binding
GO:0004518 ISS nuclease activity
GO:0004527 IEA exonuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006302 ISS double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006388 ISS tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 IEA mRNA processing
GO:0007275 IEA multicellular organismal development
GO:0008026 ISS ATP-dependent helicase activity
GO:0008143 ISS poly(A) binding
GO:0009615 IMP response to virus
GO:0010494 ISS cytoplasmic stress granule
GO:0016020 IEA membrane
GO:0030529 ISO ribonucleoprotein complex
GO:0032508 ISS DNA duplex unwinding
GO:0033677 ISS DNA/RNA helicase activity
GO:0043330 IMP response to exogenous dsRNA
GO:0044822 IEA poly(A) RNA binding
GO:0071920 ISS cleavage body
GO:0072669 ISS tRNA-splicing ligase complex
GO:0090305 ISS nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032117 ddx1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 protein_coding Danio_rerio
ENSG00000079785 DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 protein_coding Homo_sapiens

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