C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 60
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037640 Zfp60 10090 + 7:27731389-27753702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042641 Zfp60-002 27731511-27750461 protein_coding
  ENSMUST00000108336 Zfp60-001 27731389-27753702 protein_coding
  ENSMUST00000125228 Zfp60-007 27736367-27738571 retained_intron
  ENSMUST00000126884 Zfp60-003 27731411-27742325 retained_intron
  ENSMUST00000130997 Zfp60-005 27731432-27748223 protein_coding
  ENSMUST00000136373 Zfp60-006 27731443-27748546 nonsense_mediated_decay
  ENSMUST00000141753 Zfp60-004 27736927-27738691 retained_intron
  ENSMUST00000167955 Zfp60-201 27736956-27750023 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042641ENSMUST00000108336ENSMUST00000125228ENSMUST00000126884ENSMUST00000130997ENSMUST00000167955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.370±0.11 1.446±0.32 N/A N/A
ENSMUST00000108336 1.281±0.60 0.476±0.19 2.555±0.05 12.594±6.14 0.742±0.24 0.345±0.21 0.913±0.12 1.219±0.26 1.090±0.58 1.412±0.30 0.680±0.11 1.471±0.82 1.734±0.39 0.962±0.40
ENSMUST00000125228 N/A 0.588±0.16 N/A N/A N/A 0.495±0.07 N/A N/A N/A N/A N/A 0.859±0.00 N/A 27.933±2.15
ENSMUST00000126884 N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A 1.230±0.33 N/A N/A
ENSMUST00000130997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.433±0.00
ENSMUST00000167955 0.332±0.00 N/A N/A N/A N/A 0.470±0.00 N/A N/A N/A N/A N/A 1.695±0.64 1.248±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074922 zgc:174649 zgc:174649 protein_coding Danio_rerio
ENSDARG00000075470 zgc:110238 zgc:110238 protein_coding Danio_rerio
ENSDARG00000075834 si:dkey-182i3.8 si:dkey-182i3.8 protein_coding Danio_rerio
ENSDARG00000086182 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000086278 CABZ01050664.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086368 BX663505.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086510 si:ch211-207e19.14 si:ch211-207e19.14 protein_coding Danio_rerio
ENSDARG00000086720 zgc:173603 zgc:173603 protein_coding Danio_rerio
ENSDARG00000086845 CABZ01021430.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086975 CR812792.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087249 si:dkey-7i4.17 si:dkey-7i4.17 protein_coding Danio_rerio
ENSDARG00000087320 CABZ01017734.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087355 BX294653.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087700 si:ch211-229l10.12 si:ch211-229l10.12 protein_coding Danio_rerio
ENSDARG00000087824 BX324179.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087864 BX511066.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088378 si:dkeyp-4f2.4 si:dkeyp-4f2.4 protein_coding Danio_rerio
ENSDARG00000089186 CR388390.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089344 BX640461.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089363 CABZ01002718.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089587 CR450785.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090043 CABZ01054392.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090377 CABZ01003344.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090400 CR388363.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090420 BX511078.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090979 si:dkey-78o7.1 si:dkey-78o7.1 protein_coding Danio_rerio
ENSDARG00000091284 si:dkey-78k22.1 si:dkey-78k22.1 protein_coding Danio_rerio
ENSDARG00000091364 si:dkey-77p23.3 si:dkey-77p23.3 protein_coding Danio_rerio
ENSDARG00000091524 si:ch211-162i8.3 si:ch211-162i8.3 protein_coding Danio_rerio
ENSDARG00000091688 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000091793 CABZ01071911.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092000 si:ch211-286l10.1 si:ch211-286l10.1 protein_coding Danio_rerio
ENSDARG00000092215 BX901907.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092244 BX005085.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092268 CT573263.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092435 BX640584.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093143 si:dkey-77f5.5 si:dkey-77f5.5 protein_coding Danio_rerio
ENSDARG00000093500 si:ch211-120c15.2 si:ch211-120c15.2 protein_coding Danio_rerio
ENSDARG00000094175 si:dkey-29p23.3 si:dkey-29p23.3 protein_coding Danio_rerio
ENSDARG00000094313 CT027609.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094430 si:dkey-238o14.5 si:dkey-238o14.5 protein_coding Danio_rerio
ENSDARG00000094459 si:dkey-16p19.10 si:dkey-16p19.10 protein_coding Danio_rerio
ENSDARG00000094872 CR356223.5 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095440 si:dkeyp-53e4.2 si:dkeyp-53e4.2 protein_coding Danio_rerio
ENSDARG00000095708 si:dkey-77f5.16 si:dkey-77f5.16 protein_coding Danio_rerio
ENSDARG00000096123 si:dkey-14o6.4 si:dkey-14o6.4 protein_coding Danio_rerio
ENSDARG00000096171 si:dkey-9i5.4 si:dkey-9i5.4 protein_coding Danio_rerio
ENSG00000128000 ZNF780B zinc finger protein 780B protein_coding Homo_sapiens

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