C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 780B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128000 ZNF780B 9606 - 19:40028260-40056209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221355 ZNF780B-001 40033579-40056205 protein_coding
  ENST00000434248 ZNF780B-002 40028260-40056209 protein_coding
  ENST00000593605 ZNF780B-004 40047379-40056175 protein_coding
  ENST00000594811 ZNF780B-003 40047281-40056106 retained_intron
  ENST00000595995 ZNF780B-006 40036531-40056208 non_stop_decay
  ENST00000598845 ZNF780B-005 40036531-40056156 protein_coding
  ENST00000617676 ZNF780B-201 40028260-40056208 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000221355ENST00000434248ENST00000617676
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000221355 N/A N/A N/A N/A N/A 0.852±0.00 N/A 0.416±0.06 N/A N/A N/A
ENST00000434248 0.407±0.00 0.681±0.00 0.447±0.00 0.374±0.00 0.402±0.00 0.624±0.00 0.478±0.00 0.062±0.00 0.506±0.17 0.231±0.00 0.759±0.17
ENST00000617676 N/A 0.685±0.00 0.465±0.00 0.435±0.00 0.429±0.00 0.628±0.00 0.599±0.10 0.063±0.00 0.627±0.20 0.247±0.00 0.676±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0003 CGP 19:39984134-40056209
CIL_00047W CIL_00047W_0001 CGP 19:40028260-40090938

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074922 zgc:174649 zgc:174649 protein_coding Danio_rerio
ENSDARG00000075470 zgc:110238 zgc:110238 protein_coding Danio_rerio
ENSDARG00000075834 si:dkey-182i3.8 si:dkey-182i3.8 protein_coding Danio_rerio
ENSDARG00000086182 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000086278 CABZ01050664.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086368 BX663505.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086510 si:ch211-207e19.14 si:ch211-207e19.14 protein_coding Danio_rerio
ENSDARG00000086720 zgc:173603 zgc:173603 protein_coding Danio_rerio
ENSDARG00000086845 CABZ01021430.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086975 CR812792.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087249 si:dkey-7i4.17 si:dkey-7i4.17 protein_coding Danio_rerio
ENSDARG00000087320 CABZ01017734.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087355 BX294653.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087700 si:ch211-229l10.12 si:ch211-229l10.12 protein_coding Danio_rerio
ENSDARG00000087824 BX324179.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087864 BX511066.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088378 si:dkeyp-4f2.4 si:dkeyp-4f2.4 protein_coding Danio_rerio
ENSDARG00000089186 CR388390.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089344 BX640461.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089363 CABZ01002718.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089587 CR450785.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090043 CABZ01054392.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090377 CABZ01003344.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090400 CR388363.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090420 BX511078.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090979 si:dkey-78o7.1 si:dkey-78o7.1 protein_coding Danio_rerio
ENSDARG00000091284 si:dkey-78k22.1 si:dkey-78k22.1 protein_coding Danio_rerio
ENSDARG00000091364 si:dkey-77p23.3 si:dkey-77p23.3 protein_coding Danio_rerio
ENSDARG00000091524 si:ch211-162i8.3 si:ch211-162i8.3 protein_coding Danio_rerio
ENSDARG00000091688 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000091793 CABZ01071911.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092000 si:ch211-286l10.1 si:ch211-286l10.1 protein_coding Danio_rerio
ENSDARG00000092215 BX901907.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092244 BX005085.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092268 CT573263.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092435 BX640584.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093143 si:dkey-77f5.5 si:dkey-77f5.5 protein_coding Danio_rerio
ENSDARG00000093500 si:ch211-120c15.2 si:ch211-120c15.2 protein_coding Danio_rerio
ENSDARG00000094175 si:dkey-29p23.3 si:dkey-29p23.3 protein_coding Danio_rerio
ENSDARG00000094313 CT027609.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094430 si:dkey-238o14.5 si:dkey-238o14.5 protein_coding Danio_rerio
ENSDARG00000094459 si:dkey-16p19.10 si:dkey-16p19.10 protein_coding Danio_rerio
ENSDARG00000094872 CR356223.5 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095440 si:dkeyp-53e4.2 si:dkeyp-53e4.2 protein_coding Danio_rerio
ENSDARG00000095708 si:dkey-77f5.16 si:dkey-77f5.16 protein_coding Danio_rerio
ENSDARG00000096123 si:dkey-14o6.4 si:dkey-14o6.4 protein_coding Danio_rerio
ENSDARG00000096171 si:dkey-9i5.4 si:dkey-9i5.4 protein_coding Danio_rerio
ENSMUSG00000037640 Zfp60 zinc finger protein 60 protein_coding Mus_musculus
ENSMUSG00000063047 Zfp780b zinc finger protein 780B protein_coding Mus_musculus
ENSMUSG00000070709 1700049G17Rik RIKEN cDNA 1700049G17 gene protein_coding Mus_musculus

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