C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear fragile X mental retardation protein interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037857 Nufip2 10090 + 11:77686155-77741921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100802 Nufip2-001 77686155-77712741 protein_coding
  ENSMUST00000126942 Nufip2-002 77687459-77691920 processed_transcript
  ENSMUST00000155238 Nufip2-003 77687601-77691718 processed_transcript
  ENSMUST00000181023 Nufip2-004 77686172-77741921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100802ENSMUST00000126942ENSMUST00000181023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100802 6.579±2.04 24.095±4.45 4.123±0.23 4.361±0.36 14.643±9.29 11.340±4.06 5.398±1.64 7.522±2.43 6.386±2.43 15.200±5.39 2.813±0.44 21.419±12.83 7.097±2.70 4.480±2.48
ENSMUST00000126942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.263±8.59 N/A
ENSMUST00000181023 1.619±0.08 N/A N/A N/A 3.852±1.43 5.679±1.60 N/A 2.470±0.87 N/A N/A N/A 7.128±2.13 8.207±3.70 5.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0016020 IEA membrane
GO:0042788 ISS polysomal ribosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069066 nufip2 nuclear fragile X mental retardation protein interacting protein 2 protein_coding Danio_rerio
ENSG00000108256 NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 protein_coding Homo_sapiens

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