C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear fragile X mental retardation protein interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100802 Nufip2-001 ENSMUSG00000037857 10090 + 11:77686155-77712741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100802 6.579±2.04 24.095±4.45 4.123±0.23 4.361±0.36 14.643±9.29 11.340±4.06 5.398±1.64 7.522±2.43 6.386±2.43 15.200±5.39 2.813±0.44 21.419±12.83 7.097±2.70 4.480±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 ISS RNA binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0016020 IEA membrane
GO:0042788 ISS polysomal ribosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225388 NUFIP2-001 protein_coding Homo_sapiens 0 4024
ENST00000579665 NUFIP2-002 protein_coding Homo_sapiens 0 579

Loading