C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110032A03 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037971 1110032A03Rik 10090 - 9:50762828-50775520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042468 1110032A03Rik-001 50762828-50768452 protein_coding
  ENSMUST00000042576 1110032A03Rik-002 50763703-50766102 protein_coding
  ENSMUST00000176160 1110032A03Rik-008 50768594-50770948 processed_transcript
  ENSMUST00000176238 1110032A03Rik-010 50763857-50768160 protein_coding
  ENSMUST00000176682 1110032A03Rik-004 50763730-50764562 retained_intron
  ENSMUST00000176894 1110032A03Rik-003 50763727-50775520 retained_intron
  ENSMUST00000177022 1110032A03Rik-005 50764811-50768169 processed_transcript
  ENSMUST00000177142 1110032A03Rik-006 50764697-50768098 processed_transcript
  ENSMUST00000177546 1110032A03Rik-007 50763701-50768121 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042468ENSMUST00000042576ENSMUST00000176238ENSMUST00000177546
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042468 N/A N/A N/A N/A N/A N/A N/A N/A 3.749±0.30 N/A 2.075±0.16 3.505±0.13 N/A 7.167±0.00
ENSMUST00000042576 N/A N/A 11.788±0.00 9.102±0.00 N/A N/A N/A N/A N/A N/A 2.991±0.47 8.382±0.15 N/A 113.953±30.18
ENSMUST00000176238 54.924±23.58 28.621±2.28 24.906±0.00 N/A 46.135±12.31 24.193±2.97 14.803±3.40 51.384±4.65 26.963±1.76 35.966±2.58 7.272±0.75 26.741±5.75 28.520±0.00 251.993±10.88
ENSMUST00000177546 N/A N/A N/A 20.026±0.00 N/A N/A N/A N/A N/A N/A N/A 39.109±0.00 51.969±14.32 135.357±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TF CIL_0002TF_0002 CGP 9:50752758-50775520

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090173 C5H11orf1 chromosome 11 open reading frame 1 protein_coding Danio_rerio
ENSG00000137720 C11orf1 chromosome 11 open reading frame 1 protein_coding Homo_sapiens

Loading