C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052447-ENSDARG00000090173 CGP 7955 5:58990767-59001354
GeneTranscriptPositionBiotype
ENSDARG00000052447 (cryabb)
crystallin, alpha B, b 		ENSDART00000060989 (cryabb-001) 58990767-58995100 protein_coding
ENSDART00000122492 (cryabb-002) 58990816-58994077 protein_coding
ENSDART00000148665 (cryabb-003) 58990938-59000186 protein_coding
ENSDARG00000090173 (C5H11orf1)
chromosome 11 open reading frame 1 		ENSDART00000127271 (C5H11orf1-201) 58996568-59001354 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002TF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032060-ENSMUSG00000037971 CGP 10090 9:50752758-50775520
GeneTranscriptPositionBiotype
ENSMUSG00000032059 (Alg9)
asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase) 		ENSMUST00000034561 (Alg9-001) 50775019-50843528 protein_coding
ENSMUST00000159576 (Alg9-003) 50775367-50789515 protein_coding
ENSMUST00000161200 (Alg9-006) 50823043-50842971 processed_transcript
ENSMUST00000162073 (Alg9-002) 50775305-50843542 nonsense_mediated_decay
ENSMUST00000162363 (Alg9-004) 50775546-50783328 processed_transcript
ENSMUST00000162442 (Alg9-005) 50776109-50779104 processed_transcript
ENSMUST00000162596 (Alg9-007) 50835571-50843091 processed_transcript
ENSMUST00000175728 (Alg9-009) 50808679-50843362 protein_coding
ENSMUST00000177320 (Alg9-008) 50802069-50842763 nonsense_mediated_decay
ENSMUSG00000032060 (Cryab)
crystallin, alpha B 		ENSMUST00000034562 (Cryab-201) 50752758-50756633 protein_coding
ENSMUSG00000037845 (Fdxacb1)
ferredoxin-fold anticodon binding domain containing 1 		ENSMUST00000042391 (Fdxacb1-001) 50768236-50773348 protein_coding
ENSMUST00000176145 (Fdxacb1-005) 50768251-50771591 nonsense_mediated_decay
ENSMUST00000176335 (Fdxacb1-003) 50768445-50772643 protein_coding
ENSMUST00000176619 (Fdxacb1-002) 50768238-50772669 retained_intron
ENSMUST00000177384 (Fdxacb1-004) 50770062-50771537 protein_coding
ENSMUSG00000037971 (1110032A03Rik)
RIKEN cDNA 1110032A03 gene 		ENSMUST00000042468 (1110032A03Rik-001) 50762828-50768452 protein_coding
ENSMUST00000042576 (1110032A03Rik-002) 50763703-50766102 protein_coding
ENSMUST00000176160 (1110032A03Rik-008) 50768594-50770948 processed_transcript
ENSMUST00000176238 (1110032A03Rik-010) 50763857-50768160 protein_coding
ENSMUST00000176682 (1110032A03Rik-004) 50763730-50764562 retained_intron
ENSMUST00000176894 (1110032A03Rik-003) 50763727-50775520 retained_intron
ENSMUST00000177022 (1110032A03Rik-005) 50764811-50768169 processed_transcript
ENSMUST00000177142 (1110032A03Rik-006) 50764697-50768098 processed_transcript
ENSMUST00000177546 (1110032A03Rik-007) 50763701-50768121 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TF_0001ENSDARG00000052447ENSDART00000060989ENSDART00000122492ENSDART00000148665ENSDARG00000090173ENSDART00000127271CIL_0002TF_0002ENSMUSG00000032059ENSMUST00000034561ENSMUST00000159576ENSMUST00000161200ENSMUST00000162073ENSMUST00000162363ENSMUST00000162442ENSMUST00000162596ENSMUST00000175728ENSMUST00000177320ENSMUSG00000032060ENSMUST00000034562ENSMUSG00000037845ENSMUST00000042391ENSMUST00000176145ENSMUST00000176335ENSMUST00000176619ENSMUST00000177384ENSMUSG00000037971ENSMUST00000042468ENSMUST00000042576ENSMUST00000176160ENSMUST00000176238ENSMUST00000176682ENSMUST00000176894ENSMUST00000177022ENSMUST00000177142ENSMUST00000177546
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TF_0001ENSDARG00000052447ENSDART00000060989ENSDART00000122492ENSDART00000148665ENSDARG00000090173ENSDART00000127271CIL_0002TF_0002ENSMUSG00000032059ENSMUST00000034561ENSMUST00000162073ENSMUSG00000032060ENSMUST00000034562ENSMUSG00000037845ENSMUST00000042391ENSMUST00000176335ENSMUSG00000037971ENSMUST00000042468ENSMUST00000042576ENSMUST00000176238ENSMUST00000177546
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052447 ENSDART00000060989 N/A N/A N/A 2.409±0.71 N/A N/A 2.773±0.00 0.299±0.06 N/A N/A N/A N/A N/A N/A
ENSDART00000122492 N/A N/A N/A N/A N/A N/A 1.463±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148665 N/A N/A N/A N/A N/A N/A 2.398±0.00 2.382±2.42 N/A N/A 2.306±0.00 N/A N/A N/A
ENSDARG00000090173 ENSDART00000127271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.770±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032059 ENSMUST00000034561 11.544±1.92 6.910±2.00 8.017±0.29 11.803±6.53 10.751±2.90 8.331±2.77 4.858±0.22 8.877±0.93 6.267±1.26 10.014±1.69 2.106±0.46 7.509±2.19 8.921±1.70 17.134±1.55
ENSMUST00000159576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162073 7.914±1.06 6.686±1.90 4.736±0.00 16.815±3.97 5.381±0.98 8.724±0.94 N/A 5.125±0.43 3.290±0.71 5.178±1.04 2.013±0.00 8.090±1.92 7.510±1.97 N/A
ENSMUST00000162363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032060 ENSMUST00000034562 58.384±31.40 20.682±2.68 32.129±14.19 5.434±5.77 45.706±9.05 23.551±6.14 609.615±199.95 125.861±32.72 1.602±0.51 76.251±26.23 132.518±73.27 23.118±10.04 30.848±32.78 1.034±0.52
ENSMUSG00000037845 ENSMUST00000042391 N/A N/A 4.325±0.00 N/A N/A N/A 2.274±0.19 N/A 4.309±1.18 N/A 1.635±0.18 N/A 5.703±0.25 N/A
ENSMUST00000176145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.377±0.00 N/A
ENSMUST00000176619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037971 ENSMUST00000042468 N/A N/A N/A N/A N/A N/A N/A N/A 3.749±0.30 N/A 2.075±0.16 3.505±0.13 N/A 7.167±0.00
ENSMUST00000042576 N/A N/A 11.788±0.00 9.102±0.00 N/A N/A N/A N/A N/A N/A 2.991±0.47 8.382±0.15 N/A 113.953±30.18
ENSMUST00000176160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176238 54.924±23.58 28.621±2.28 24.906±0.00 N/A 46.135±12.31 24.193±2.97 14.803±3.40 51.384±4.65 26.963±1.76 35.966±2.58 7.272±0.75 26.741±5.75 28.520±0.00 251.993±10.88
ENSMUST00000176682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177546 N/A N/A N/A 20.026±0.00 N/A N/A N/A N/A N/A N/A N/A 39.109±0.00 51.969±14.32 135.357±0.00

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