C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 92
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037979 Ccdc92 10090 - 5:124834418-124862424 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036206 Ccdc92-001 124834418-124862424 protein_coding
  ENSMUST00000135495 Ccdc92-002 124834418-124861885 nonsense_mediated_decay
  ENSMUST00000143268 Ccdc92-004 124836070-124851583 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036206ENSMUST00000135495ENSMUST00000143268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036206 0.674±0.56 2.052±0.65 2.691±0.02 10.300±1.56 3.481±0.82 2.087±0.30 0.261±0.18 2.129±0.79 0.136±0.04 7.072±0.70 0.206±0.06 4.266±1.18 1.794±0.89 26.501±0.00
ENSMUST00000135495 0.084±0.00 0.418±0.00 N/A N/A N/A N/A 0.309±0.00 N/A 0.066±0.01 N/A 0.099±0.07 N/A N/A 70.420±14.02
ENSMUST00000143268 N/A N/A N/A 125.275±0.00 N/A N/A N/A N/A N/A N/A 0.207±0.05 12.936±0.00 11.859±5.49 1843.720±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000393 CIL_000393_0002 CGP 5:124725085-124862424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005814 IEA centriole
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041750 ccdc92 coiled-coil domain containing 92 protein_coding Danio_rerio
ENSG00000119242 CCDC92 coiled-coil domain containing 92 protein_coding Homo_sapiens

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